KEGG   Lautropia mirabilis: NCTC12852_00762
Entry
NCTC12852_00762   CDS       T05799                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lmir  Lautropia mirabilis
Pathway
lmir03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lmir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NCTC12852_00762 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmir03021]
    NCTC12852_00762 (rpoA)
   03400 DNA repair and recombination proteins [BR:lmir03400]
    NCTC12852_00762 (rpoA)
Enzymes [BR:lmir01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NCTC12852_00762 (rpoA)
Transcription machinery [BR:lmir03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NCTC12852_00762 (rpoA)
DNA repair and recombination proteins [BR:lmir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NCTC12852_00762 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2
Other DBs
NCBI-ProteinID: VEH00466
Position
1:937916..938995
AA seq 359 aa
MQTAMLKPRLVEVQEISGPSHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVQIA
GVVHEYSTVDGLREDVVDLLLNLKGVVFKLRGRSEVFLTLRKEVPGPVKASDIELPHDVE
IINPDHVIATLTEGGKLDMQIKVEQGRGYVPGNMRNLGDSKTIGRIVLDASFSPVRRVSY
AVESARVEQRTDLDRLLIDIETNGAIAPEEAVRKSAAILVDQLQVFASIEGNDPAVPIGG
SQTPMGATIGGHVSSVPSGVEGLGAGGAAGFGASTGTIDPILLRPVDDLELTVRSANCLK
AENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLASRGLTLGMRLDDWPPAGLERSS
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgcagactgcaatgctcaagccacgccttgtggaagtccaggagatcagtggaccttcg
catgctcgcgtggtgatggagcctttcgagcgtggctacggccatacgctcggcaacgca
ttgcggcgcgtgctgctgtcctccatggttggctacgcgccgaccgaggtgcagatcgcc
ggtgtggtgcacgagtattcgacggtggacgggctgcgtgaagacgtggtcgatctgctg
ctgaacctgaaaggcgtcgttttcaaactgcgcggccgcagcgaagtgttcctcacgctg
cgcaaggaagtgcccggtccggtcaaggcctccgatatcgagctgccgcacgatgtcgag
atcatcaaccccgatcacgtcattgcgacgctgaccgagggcggcaagctggacatgcag
atcaaggtcgagcagggccgtggctatgtgcccggcaacatgcgcaacctgggtgacagc
aagaccatcggccgcatcgttctggatgcctccttctcgcccgtccggcgcgtcagctac
gcggtcgaaagcgcccgtgtggaacagcgtaccgacctggaccgtctgctgatcgacatc
gagaccaacggcgccatcgcgcccgaggaagcggtgcgcaagtcggcagccatcctggtt
gaccagctgcaggtgttcgcctccatcgaaggcaacgatccggctgtgcccatcggtggc
agccagacccccatgggcgccaccattggcggtcacgtttccagcgtgccgtcgggcgtc
gaaggtctgggtgccggcggtgctgctggcttcggtgcgtccacgggcacgatcgatccg
atcctgctgcgtccggtcgacgacctggagctgactgtccgctctgcaaactgcctgaag
gccgagaacatctattacatcggtgatctgatccagcgcacggaaaacgagctgctgaag
acgccgaacctcggtcggaagtctctcaacgaaatcaaggaagtgctggcgtcgcgtggt
ctgacgctggggatgcggctggacgactggccgcctgccgggttggagcgttccagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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