KEGG   Lautropia mirabilis: NCTC12852_02500
Entry
NCTC12852_02500   CDS       T05799                                 
Symbol
nrdE
Name
(GenBank) Ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
lmir  Lautropia mirabilis
Pathway
lmir00230  Purine metabolism
lmir00240  Pyrimidine metabolism
lmir01100  Metabolic pathways
lmir01232  Nucleotide metabolism
Module
lmir_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
lmir_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:lmir00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    NCTC12852_02500 (nrdE)
   00240 Pyrimidine metabolism
    NCTC12852_02500 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmir03400]
    NCTC12852_02500 (nrdE)
Enzymes [BR:lmir01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     NCTC12852_02500 (nrdE)
DNA repair and recombination proteins [BR:lmir03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    NCTC12852_02500 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: VEH03769
Position
1:complement(3047400..3049928)
AA seq 842 aa
MARCALSFWNVRPMKRDVLPAAHTSSALPVQPISQDVLAEKYLKDGEKTEAELFARVARA
LASVEKPEIRDEWEAKFLGNLHAGAIGAGRIMSAAGTDIQATLINCFVQPVGDCIQGYDD
QGYPGIYEALREAAETMRRGGGVGYDFSRIRPNGAEVKGTHSIASGPCSYINVFDQSCAT
VESAGSRRGAQMGVLRIDHPDVLDFITAKRTPGRWNNFNVSVGVTDAFMKALQDNADWEL
VHRARPGRKVMAAGAYQRDDGKWVYRRVPARQLWDTIMKSTYDFAEPGILFLDAIGRDNN
LNYCETIEATNPCGEQPLPPYGCCDLGPIILTRFVRNAFGHGGEPTFDFAAFEDVVAIQV
RALDNVLDVTFWPLDKQRAEAAAKRRIGVGFTGLGNTLAMLKLRYDRAEGRAMAARIAET
MRNAAYRASVELAKEKGAFPQFDADRYLGKGSKKGEGSFASRLPDDIKADIRKYGIRNSH
LLSIAPTGTVSLAFADNASNGIEPPFSWTYTRRKREADGSRSEYVVEDHAWRLFKSQGGD
VDNLPDYFVNALAMTAQEHVAMMEAVQPYVDTSISKTVNVPADYPYEDFKDLYQQAWKAR
LKGLATYRPNPILGAVLEAEPAKKEEKPADKAEAAAQQHEQDPMRKVIERRPQGALNAVA
EKIEYWTHEGQQRLYLIVSFLPVEGTDGRTVERAIEFFMPVGQSGESQQWITATMRMLSL
AARGGFLDRALSDMRKVTWDRGPVRLGTYVKADGTHVPRWHDSEVAAIAYAIQNLIAKRQ
EAVQASLFEPGELPSVEPAVQAAPESSGIMAGKKCSECGAYAMIRKDGCDYCTQCGMLGS
CG
NT seq 2529 nt   +upstreamnt  +downstreamnt
atggcccgttgcgccctgtcgttctggaatgtacgccctatgaaacgtgatgtcctgcct
gccgcccacacctcgtcggcgctgcccgtccagcccatcagccaggatgtgctggccgag
aagtacctgaaggacggtgagaagaccgaagccgagctgtttgcccgggtggcgcgcgcg
ctggcctcggtcgagaagcccgagatccgtgacgagtgggaagcaaagttcctgggcaac
ctgcatgccggtgccatcggtgcgggccgcatcatgagcgcagccggtaccgatatccag
gccaccctcatcaactgtttcgtgcagcccgtgggcgactgcatccagggctacgacgac
cagggctaccccggcatctacgaggccctgcgcgaggcggccgaaaccatgcgtcgcggc
ggtggcgtcggctacgacttctcccgcatccgccccaacggcgccgaggtcaagggcacg
cactccatcgcctccggcccgtgcagctacatcaacgtcttcgaccagagctgcgccacc
gtcgagagcgccggcagccgccgtggcgcccagatgggcgtgctgcgcatcgatcatccg
gacgtgctggacttcatcaccgccaagcgcaccccgggccgctggaacaacttcaacgtc
tcggtcggcgtcaccgacgccttcatgaaggccctgcaggacaacgccgactgggagctg
gtgcaccgcgcccgccccggccgcaaggtcatggccgcaggcgcctatcagcgtgacgac
ggcaagtgggtctaccgccgcgtgccggcccggcagctgtgggacacgatcatgaagtcc
acctacgacttcgccgagcccggcatcctgttcctcgacgccatcggccgcgacaacaac
ctcaactactgcgagaccatcgaggccaccaacccctgtggcgagcagccgctgccgccc
tacggctgctgcgacctgggtcccatcatcctgacccgcttcgtgcgcaacgccttcggg
catggcggcgagccgaccttcgacttcgccgccttcgaggacgtggtggccatccaggtg
cgcgctctcgacaacgtgctggacgtgaccttctggccgctggacaagcagcgcgccgaa
gccgccgccaagcgccgcatcggcgtgggcttcaccggcctgggcaacacgctggccatg
ctgaagctgcgctacgaccgcgccgagggccgcgccatggccgcccgcattgccgagacc
atgcgcaacgccgcttaccgtgcctcggtcgagctggccaaggagaagggcgccttcccg
cagttcgacgccgatcgctacctgggcaagggcagcaagaagggtgagggcagctttgcc
tctcgcctgcctgacgacatcaaggccgacatccgcaagtacggcatccgcaacagccac
ctgctgtccatcgcgcctaccggcacggtcagcctggcctttgccgacaacgccagcaac
ggcatcgagccgccgttctcctggacctacacgcgtcgcaagcgcgaggccgacggcagc
cgcagcgaatacgtggtcgaggatcacgcctggcggctgttcaagtcgcagggcggcgac
gtggacaacctgcccgactacttcgtcaacgccctggccatgacggcccaggaacacgtg
gcgatgatggaggccgtgcagccctacgtcgacacctccatctccaagaccgtcaacgtc
ccggccgactacccgtacgaagacttcaaggacctgtaccagcaggcctggaaggcccgc
ctgaagggtctggccacctaccggcccaatcccatcctgggcgccgtgctggaagccgag
cctgccaagaaggaagagaagcctgccgacaaggccgaggccgccgcgcagcagcacgag
caggatccgatgcgcaaggtgatcgagcgccgtccgcagggtgcgctcaacgccgtggcc
gagaagatcgagtactggacgcacgaaggccagcagcggctctacctcatcgtctccttc
ctgccggtcgagggcaccgatggtcgtaccgtcgagcgcgccatcgagttcttcatgccc
gtgggccagagcggcgaatcgcagcagtggatcaccgccaccatgcggatgctcagcctg
gcggcccgtggcggcttcctcgaccgtgcactgtccgacatgcgcaaggtcacctgggac
cgtggcccggtgcgtctgggcacctatgtgaaggccgatggcacccacgtgccgcgctgg
cacgacagtgaagtcgccgccatcgcctacgccattcagaacctcatcgccaagcgccag
gaggccgtgcaggcctcgctgttcgagccgggcgagctgccgtcggtcgagccggccgtg
caggctgcccccgaatcctcgggcatcatggccgggaaaaaatgcagcgagtgtggtgcc
tatgcgatgatccggaaagatggctgcgactactgcacccagtgcggcatgctcggcagc
tgcggttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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