KEGG   Listeria monocytogenes 08-5578 (serotype 1/2a): LM5578_1982
Entry
LM5578_1982       CDS       T01157                                 
Name
(GenBank) hypothetical protein
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
lmn  Listeria monocytogenes 08-5578 (serotype 1/2a)
Pathway
lmn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lmn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LM5578_1982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmn03400]
    LM5578_1982
Enzymes [BR:lmn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     LM5578_1982
DNA repair and recombination proteins [BR:lmn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     LM5578_1982
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: ADB68729
Position
1976323..1977078
AA seq 251 aa
MRLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDYWNYAVKK
GYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRM
TFEDAILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDA
GFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGS
DHCPVELELNF
NT seq 756 nt   +upstreamnt  +downstreamnt
gtgagattaatttcttggaatgtaaatggacttcgagcagctgtaaaaaaaggctttttg
gagtattttgaagaagtagatgcagatattttctgtttgcaagagacgaaattgcaagaa
ggacaaattgaactggatttacctgcatataaagattactggaattatgcggtgaaaaaa
ggttattcaggtactgcgatttttacaaaagtggagccgttatcggttcaatatggttta
ggtattccagagcatgatacagaaggccgggttatcacacttgaatttgaggaattcttt
atggtaacggtttataccccgaattcgcaagcggagttgaaacgactagattaccgaatg
acgtttgaggatgcgattttggaatatgtaaagaacctagataacacaaaacctgttgtc
ctttgtggtgatttgaatgttgcgcacgaagaaattgatttgaaaaatccgaagacaaat
cgtaaaaatgctggcttctcagatgaggaacgcgcaaaattctctgcatttttagacgct
ggatttattgatagtttccgttatttttatccagatttgaccgatgcttattcttggtgg
tcttaccgaatgaacgcgcgtgctaggaatactggttggcggattgattattttgttgta
tcggaacgtttgaaagataagttagtggatgcaaaaattcatgcggatgtgcttggttcg
gatcattgtcctgtcgagctagaacttaatttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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