KEGG   Listeria monocytogenes 08-5578 (serotype 1/2a): LM5578_2656
Entry
LM5578_2656       CDS       T01157                                 
Symbol
sigL
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lmn  Listeria monocytogenes 08-5578 (serotype 1/2a)
Pathway
lmn02020  Two-component system
lmn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lmn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LM5578_2656 (sigL)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LM5578_2656 (sigL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmn03021]
    LM5578_2656 (sigL)
Transcription machinery [BR:lmn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LM5578_2656 (sigL)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Sigma70_r4 HTH_3 HTH_23 LacI HTH_IclR HTH_17 Sigma70_r4_2 MarR_2 Fe_dep_repress HTH_11 HTH_Tnp_ISL3 HTH_6 HTH_31 HTH_38 HTH_AraC HTH_20 HTH_Crp_2 ATG11 MarR HTH_29 HTH_28 nos_propeller
Other DBs
NCBI-ProteinID: ADB69402
Position
complement(2646816..2648159)
AA seq 447 aa
MRLESNFVQKQQQKQSQKLNMTQQLSQSIAMLQFATADLVAFLEDKALENPLIEVIPGSD
FATDFSYSSRKSAGSSDDTDWLEQIADNKMTLADALKEQLHLMDVTQTQKIIVLYLIESL
NDNGYLQIDLKDVSAALLMDDSSVLEGLEILQSMEPAGVGARDARECILLQIERSPDAPY
IAYDVIQKFFTEFAEKKWKKIASEMDVSLQDIQEVSDYIQTLNPKPGSEFESERVQYVVP
DLILLQHEDEFAVSLAKQFLPQVRFQEAYYETMRATEEKDVAQFLREKAGEFDWIKKGIE
QRESTLQRVGEAIVSHQKAYFLDNSAHLQPLTLKEVAEELGVHESTVSRAVNGKYMETTN
GVYELKRFFASGLQKKSSENENIGDISSTTIKMLVQEFVAAEDKLKPLSDQKIVDMLAEK
EIQVSRRAIAKYRLELNIPSSSKRKRF
NT seq 1344 nt   +upstreamnt  +downstreamnt
gtgcgtttagaatctaatttcgtccaaaagcaacaacaaaagcagtcacagaaattaaat
atgacgcaacaattgtcccagtctattgcaatgcttcaatttgcaacggctgatttagtg
gcatttttagaagataaagcactcgagaacccattaattgaagtgattccaggctcggat
ttcgcaacagatttttcatacagcagccgtaaaagcgctggaagttctgatgatacagat
tggttggaacaaatagctgataacaaaatgactttagccgatgcgctaaaagaacaacta
catttaatggacgtaacgcaaacacaaaaaattatcgttttatatttaatagaaagttta
aatgacaatggttatttacaaatagatttgaaagatgttagtgcggcgcttttaatggat
gattctagtgtgttagaaggcctagaaattttgcaaagcatggagccagctggcgttggt
gccagagatgcgcgcgaatgtattttactacaaatcgaacgctcgccggatgctccatat
attgcctatgatgtaatccaaaaatttttcacggaattcgcagagaaaaaatggaagaaa
atcgcttcagaaatggatgttagtttgcaagatattcaagaggtttcggattacattcaa
accttaaatccgaagccgggttctgagtttgagtccgaacgtgtccaatatgttgttccg
gatttaattttacttcaacacgaagatgaatttgctgtttcactagcaaaacaatttcta
ccgcaagttcgtttccaagaagcatactacgaaacgatgcgagcgactgaagaaaaagac
gtcgcccagtttctacgtgaaaaagctggcgaatttgattggattaaaaaaggcatcgaa
caacgcgaaagtactttacaaagagttggtgaagcgattgtcagccatcaaaaagcttat
ttcctagataactcggcgcatttacaaccattaaccttgaaagaagtggcggaagagcta
ggcgtgcatgaatccacagtgagccgtgcggtgaatgggaaatacatggaaacgacgaat
ggcgtatacgaattaaaacgtttctttgcgtccggtttacaaaagaaatcttccgaaaac
gaaaacatcggtgatatctcaagcacgactatcaaaatgttagtacaagaatttgtagca
gcagaagataaattaaaaccattgtccgatcaaaaaatagtagatatgctcgcagaaaaa
gaaattcaagtttcaagaagagctatcgcgaagtatcgtttagagttaaatattccttct
tcctctaaaagaaaaagattttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (33)   

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