KEGG   Listeria monocytogenes EGD-e (serotype 1/2a): lmo2267
Entry
lmo2267           CDS       T00066                                 
Name
(RefSeq) ATP-dependent deoxyribonuclease subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
lmo  Listeria monocytogenes EGD-e (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:lmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmo03400]
    lmo2267
Enzymes [BR:lmo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     lmo2267
DNA repair and recombination proteins [BR:lmo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     lmo2267
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD AAA_12 DUF2059 ResIII AAA_16
Other DBs
NCBI-GeneID: 985303
NCBI-ProteinID: NP_465791
Pasteur: LMO02267
UniProt: Q8Y511
Position
complement(2352616..2356323)
AA seq 1235 aa
MSLNIPPKPEESLWTDDQWKAIQAKGNNVLVAAAAGSGKTAVLVTRIIEKLIDESANLNV
DELLIVTFTNASAAEMKFRIGKGLEEALGQNPDSAHLKRQVALLNYASISTLHSFCLEII
RKYYFEADIDPSFRLIEPIESSMIRDEVLEGLLEQEYGIENNEAFFHLVESFTGDRSDAE
LHSLISKLYDFSRANPDPNAWLEAMVNFYNTEEITSITELPYFPIIKEDIELRVNQAKNY
LLNAINYANENNGPAPYLATLENDLVQIQALSELNWSSWTHLKTSIENIDFKRIPTLKNK
SDYDEVYVEEAKKFRDAAKKEMKNIATDWFSREEVNCLSDLEKMKPDIQTLSELVKKFSA
NFFEEKQQRGVLDFNDLEHLALKILLNDDKASEVAQNYQKQFKEVLIDEYQDTNMVQETI
LRLVTNPSEAQGNLFMVGDVKQSIYRFRLAEPTLFMTKYQTFQQDGSGNGIRIDLSQNFR
SRKEVLDATNFIFRQLMDKHIAEIDYDTAAELTLGANFPETNAMETELLLIDMKTEDTET
EDELSPQELQKNQVESRAIAMKIREMIDNKFPIYDKKLKQNRPIQYRDIIILSRAMTSAP
DMEEAMKVQDIPFYANNNSGYFETTEVATMIALMKVVDNPYQDIPLAAVLRSPIIGLNEE
ELGQIRMAKKKGYFYDALLTYKDITVSETANKISDFVQQLNNWRELSIRENLTSLIWQIY
QETNFYEFVGGLPGGKQRQANLRALYDRANQYEKTSFRGLFRFVRFVERLEIRGDDLGTA
KTLGEKEDVVRMMTIHASKGLEFPVVIVSGLSRKFNMRDIYSKTLLDKDYGFASSYRDVE
KMIVYPTIMQQAIKQKKSREMIAEEMRVLYVALTRAEEKLILVATVPDFEKTSKNWLQVA
KEKETILPAATRAKAKCYLDWIGNATIRHPAFKELLCEEIIQTLATEMKLQIEIKTKEMF
LTNELERAESDNWLENIKEHQPVPIQSPYKDEIQRYMEYEYQNEAATEIRAKQSVTELKR
QFSLQDSWSDTTLLKEFQKVSLDRPKFLQKNKLSATEIGTAMHTLMQAVSLDYKPTKEDL
EQLLHTMREKDILTDVQIKAINIKQILDFFESPLGETMLQKKDLVKREVPFSYLLPVSEL
YEKVDLDERVLIQGVVDSMIEEEETITLIDYKTDKIEGRYADWNAAEKVMKERYHIQIKL
YAEAIQAISGKKVAAAYLYFFDGQHICQINTKEGL
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgagtttaaatataccgccaaaaccagaagagtcattatggacagacgaccaatggaaa
gccattcaagctaaaggcaataatgtacttgttgctgctgctgctggttctgggaaaaca
gctgtcctagtcactagaatcattgaaaagttaatagatgagtcagcaaacttaaatgta
gacgagttactaattgtaacttttacgaatgcttcggctgctgaaatgaagtttagaata
ggaaaaggactggaagaagctctgggacaaaatccagattcagcacatctaaaaagacaa
gtagcattacttaactatgcttctatttcaactctccattctttttgtttagaaattatt
cgaaaatactattttgaggcagatattgatccaagttttcgcttaattgagccaattgaa
agtagtatgattcgcgatgaggttttagaaggtttgctggaacaagaatatggtattgaa
aataatgaagctttttttcatttggtagaatcttttacaggagatcgttcggatgcagaa
ttgcactcattaatatctaagctatatgatttctcaagggccaacccagatccaaacgct
tggttagaagcaatggtgaacttttataatacagaagagattacttcgattacagagtta
ccttattttccaattattaaagaagatattgaattaagagtaaatcaagctaaaaactat
ttactaaacgcaataaattatgcaaatgaaaataacgggccagcaccttatttagctaca
ttagaaaatgatttagtccaaattcaagcattgtcagagttgaactggagcagttggacc
catctgaaaacatctattgaaaacatagatttcaagcgtattccgacacttaaaaataaa
agtgattacgatgaagtatatgtggaggaagcgaagaaatttcgagatgcagctaaaaaa
gaaatgaaaaatatcgcaactgactggttttcgagggaagaagtaaattgcttatctgac
ttagaaaaaatgaaaccagatattcaaactttgagtgaattggtcaaaaaattttctgca
aatttctttgaagaaaaacaacaaagaggggtattagactttaacgatttagaacattta
gcattaaaaattttattaaatgatgataaagcttcagaagttgctcaaaattatcaaaaa
caatttaaagaagtattaatcgatgagtatcaagataccaatatggtgcaagaaactatt
ctacgccttgtaacgaaccctagtgaagcgcaggggaatctattcatggttggagatgtg
aaacagtctatctatcgctttcgtttagcagagccaacattatttatgacaaagtaccaa
acattccaacaagatggtagtggaaacgggatacgcattgatttgtcacagaactttagg
agtaggaaagaagttttagatgctaccaattttatatttcgtcaattgatggataaacac
attgctgaaattgattatgataccgccgcagaattgactttaggtgcaaatttccctgaa
acaaacgctatggaaacggaacttttactaattgatatgaaaactgaggataccgaaaca
gaagatgaattatcgcctcaagaattgcaaaaaaatcaagtagaatcacgtgcgattgca
atgaaaatcagagaaatgatagacaataagtttcctatttatgataaaaaacttaaacaa
aatagacctattcaatacagagatatcattattttatcaagggcaatgacgagcgctccg
gatatggaagaagcaatgaaagttcaagatatccctttttatgcgaataataactcaggt
tattttgaaacaacagaagtagctacaatgattgcacttatgaaagtagtagataaccct
taccaagatattccgcttgctgcggttttacgttcacccataattggcttaaatgaagaa
gagttggggcaaattcgtatggcgaagaagaagggttatttctatgacgcattgctaacc
tataaggacataaccgtttcggaaacagcgaataaaattagtgattttgttcaacaatta
aacaattggcgtgaattgtccattcgagaaaatttaacgtcattgatatggcaaatctat
caagaaactaacttttatgaatttgtgggtggcttaccaggtggcaaacaacgccaagcg
aatttacgagcattatacgaccgggccaaccaatatgaaaaaacatctttccgtggtctg
ttccgttttgttcgttttgttgaacggttagaaattcgaggcgatgatttaggtaccgca
aaaacacttggtgaaaaagaagatgttgttcgcatgatgacaatccatgcgagtaaagga
ttagaatttcctgtagttattgtttctgggctaagtcgaaaatttaatatgcgggatatt
tatagcaaaacgttgttagataaagattatggctttgcatctagttatcgagatgttgag
aaaatgattgtttacccaacaattatgcagcaagcaataaagcaaaagaaatctcgtgaa
atgattgcggaagagatgcgcgtgttgtatgttgcgcttactcgtgcagaagaaaagttg
attttagtagcaacagtaccggattttgaaaaaacaagtaaaaactggctgcaagtcgca
aaagaaaaagaaactattttacctgcagccacaagagcgaaagcgaaatgctatttggat
tggataggaaacgcaacgattaggcatcctgcttttaaagaattgttgtgtgaagaaata
atccaaacacttgcgacggagatgaaactacaaattgaaataaaaacaaaagaaatgttt
ctaactaatgagctagaaagggctgaatcagataattggctggaaaatataaaagaacat
cagccagtacctattcaaagcccatataaggacgaaattcagcgatatatggagtatgag
taccaaaatgaagcggcgactgaaatacgtgctaaacagtctgtaacagagcttaagcgc
caattttctttgcaagatagctggagtgatactacactgttaaaagaattccaaaaagta
tcactggatagacctaaatttttacaaaaaaataaactctctgcaacagaaattggtacg
gcaatgcatacgcttatgcaagcagtttcgttagattataaaccgacaaaggaagatttg
gaacagcttttacacacaatgcgagaaaaagatatcttaacagatgtgcaaattaaagca
attaatatcaaacaaatattagatttctttgaatctccattaggggaaacaatgctgcag
aaaaaagatttagtaaaacgtgaagtgccatttagttatttgcttcctgtgtcagagtta
tatgaaaaagttgatttagacgaacgagtactcattcaaggtgttgtggatagtatgata
gaagaggaagaaacgattactttaattgattataaaacagataaaatagaaggaagatat
gctgattggaacgctgctgaaaaagtaatgaaagaacgatatcatattcaaatcaagctt
tatgcagaagcgattcaagcgattagcggtaaaaaagtcgctgcggcttatttatatttc
ttcgatggacaacatatatgccaaataaacacaaaggaaggtctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (58)   

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