KEGG   Listeria monocytogenes ATCC 19117 (serotype 4d): LMOATCC19117_1458
Entry
LMOATCC19117_1458 CDS       T02239                                 
Symbol
nfo
Name
(GenBank) apurinic endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
lmoa  Listeria monocytogenes ATCC 19117 (serotype 4d)
Pathway
lmoa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lmoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LMOATCC19117_1458 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmoa03400]
    LMOATCC19117_1458 (nfo)
Enzymes [BR:lmoa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     LMOATCC19117_1458 (nfo)
DNA repair and recombination proteins [BR:lmoa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     LMOATCC19117_1458 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2 CdhD
Other DBs
NCBI-ProteinID: CBY70357
Position
complement(1473190..1474083)
AA seq 297 aa
MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIEAGLEHMKA
HDMADIVVHAPYIINIGNSVKPETFELGVNFLQSEIERTRALGAKQIVLHPGAHVGEGAD
KGIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEEIAQIIDGVTHNELLSVTFDT
CHTHDAGYDIVNDFDGVLNEFDKIIGVDRLKVLHINDSKNERGAHKDRHANIGFGHIGFD
ALHYIVHHPQLADVPKILETPYVGEDKASKKAPYKWEIAMLRNGEFDPDLLNKIQNS
NT seq 894 nt   +upstreamnt  +downstreamnt
atgctaagattaggttctcatgtatcaatgagtggtaagaaaatgcttcttggcgcaagt
gaagaggcagcttcttatggctcaaatacgtttatgatttatactggcgctccgcaaaac
acgcgtagaaagccaattgaagaattaaatattgaagccggcttagaacacatgaaagca
catgatatggctgacatcgtcgttcacgcgccgtatatcatcaatattggcaattcagtg
aagccagaaacctttgaactaggtgttaatttcttgcaatctgaaattgaacgtacgcgt
gcgcttggtgccaagcaaatcgtacttcatcctggcgctcatgttggcgaaggggcagac
aaagggattaaacaaattatccaaggtcttaacgaagcattaatacatgatcaagatgta
caaattgctttagaaacaatggctggaaaaggttctgaatgcggacgtacttttgaagaa
attgctcaaattattgatggcgtaacgcataatgaattattatccgttactttcgatact
tgtcacacacatgatgctggttacgatattgtaaatgattttgacggggtgttaaatgaa
ttcgataaaattatcggtgttgatcgcttaaaagtgttacatatcaatgatagcaagaac
gaacgtggtgcacataaagaccgacacgctaacattggtttcggtcacattggctttgac
gcacttcattatattgtgcatcatccgcaattagcggacgtcccgaaaatccttgaaaca
ccttatgttggtgaagataaggcatcgaaaaaagcaccatataaatgggaaatcgcgatg
ttaagaaatggcgaatttgacccagatttattaaataaaatccaaaatagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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