KEGG T02513: BN419

Listeria monocytogenes N53-1 (serotype 1/2a): BN419_1843

Entry

BN419_1843        CDS       T02513

Name

(GenBank) DNA polymerase III subunit alpha

K02337

DNA polymerase III subunit alpha [EC:2.7.7.7]

Organism

lmob Listeria monocytogenes N53-1 (serotype 1/2a)

Pathway

lmob03030

DNA replication

lmob03430

Mismatch repair

lmob03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:lmob00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BN419_1843
   03430 Mismatch repair
    BN419_1843
   03440 Homologous recombination
    BN419_1843
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmob03032]
    BN419_1843
   03400 DNA repair and recombination proteins [BR:lmob03400]
    BN419_1843
Enzymes [BR:lmob01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BN419_1843
DNA replication proteins [BR:lmob03032]
Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BN419_1843
DNA repair and recombination proteins [BR:lmob03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BN419_1843

SSDB

Motif

Pfam:

DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DUF655

Other DBs

NCBI-ProteinID:

CCQ24160

Position

complement(1507735..1510629)

AA seq 964 aa
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHQLLKIASAIQTREEGPELPQSWLRAYSS
DLIVISPGAKGEIERLLMEEDREGALEVYANLVEIFGKESVYLSAQKENPRLFAKIETFS
SEENVPVVATKNVQYLEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQDEMERDWQ
TAFEKQACLETGELANRCHVEIALDQHLLPRFPLNEGQNASDVLRQTAFAGLKERNLLGM
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGVLTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLASILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSEASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQMENETSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDEFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNKTCKPFFWQKLSSSCLCTR
SKIN

NT seq 2895 nt +upstreamnt +downstreamnt
gtggggtttgttcatttacaagttgcgagcgcttatgatttgctatctagtacagcgtcc
atcgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtactttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattatcgggatgacggtgacaatacaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcaccagttattaaaaatcgcgagtgct
attcaaacgcgcgaagaaggaccggaattaccacaaagctggttacgagcttatagcagc
gatttgattgttatttcacctggtgccaaaggagaaatcgaacgacttctgatggaggag
gatcgcgagggagcactagaagtttatgcaaatttagtcgaaatttttggtaaagaatct
gtttatttatctgcccaaaaagaaaatccacgtcttttcgcaaaaatagaaactttttct
tcagaagaaaatgtaccggttgttgcgacgaaaaatgtacaatatttagagccaaaagat
gcgcaagcgaaagaagttttaacggccattcgtgataatcgaacagttgactggacgact
ttgccacttgccggaccaaactactttacctcgcaagatgaaatggaacgtgactggcaa
acagctttcgaaaagcaagcgtgtcttgaaacgggagaactcgcaaaccgttgtcatgtc
gaaattgctctggatcaacatttattaccaagatttccgttaaatgaaggacaaaatgca
tcagatgttttgcgtcaaacagcctttgcgggattaaaagaacgaaatttactagggatg
gaatatcaggaacgcttagaatatgaattgaaagttattacagagatggggtttgcagat
tactttctgatagtttgggatgttattcgttattcgcgtgaggcaggagttttaacaggt
ccaggtcggggttctgcggcggggtcccttgtttcctatgcacttagaattacggatgta
gacccgattcgatacaatttgctgtttgagcgatttttaaacccagaacgtatcacgatg
cccgatattgatttggattttccagataatcgccgggatgaagtgatttcgtatgtggta
tctaaatacggagaagcacatgtggcgcaaattggcacatttggaacattggctgctaaa
gcggcgattcgtgatactgcacggagttttggcttgaattccgtactattatcagaatgg
tctaagttaattccgagtcaattaggcattacgctgcaaaaagcattgcaagaaagtccg
cgtttagaaaatcatattaaaagttcaaaagaaaacgaaatgatttgggaagttgcttgt
cagctggaaggcttgccgcgtcatatttcaacgcatgcagcggggatagtaattagtgat
aagccactcgtagaacaagttgcgctacaattgggtagtggagacgcacgtttgacccag
tttgccatgggagaattagagaagattggcttacttaaaatggattttctaggacttaga
aatcttagtttactcgatcgtgttttgaaatcagtcaattatactagagaaactccgtta
acattagcagatatttctttagaggataaaaaaacattgaaactattccaaacaggcgac
acgacaggggtattccaatttgagtcagatgggattcgccgcgtgctccgaaaattaaag
ccaacttcttttgaagatgttgtggcagtagatgcgctttatcgtccgggtccaatggaa
caaattgatacgtttatcgctagaaaacacggaaaagaaaaaattcagtaccctcatcca
gatttagcgtctattttagaagtgacatacggcgttatcgtttaccaagaacaaattatt
caagtggcaaaccaaatggctggattttctcttggagaagcagatttgttaagacgagct
gttagcaagaagaaagcggatgtcctaaacgaggagcggattcactttgtagaaggcgct
aagagtaaaggctattcagaagctagcgctaaccaagtatatgatatgattgtccaattc
gcgaactacggtttcaacagaagtcacgcagcggcctattcaaaaatcgcttttcaatta
gcttacttaaaagcacattttccagccgcgttcatgtcatcacttctcagctcagttttc
ggaaacgatgacaaaatttcccaatacattacagaagcaaaaaactacggaattagcatg
ttagcgccaagcatcaaccatagtaactactacttccaaatggaaaatgagacatctatt
cgttatagtttccgtgttattcgtaaagtgccaaccaaatttattttagaaattattaac
gaacgaaaaaaagcgcctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaactgttttagaagcactcgtattttctggttgttttgacgaatttggt
gaagaccgggcaacgattttggcaacaattgatgcggtattacaatatatctcgttactc
ggtgaagattcgaaagggatgaatcttttcgcggaagatgacgaatttttgaagaagatg
aaaccgagatatcggaaaaccgcacccatttcaattgatgaaaagctggagaaagaaaaa
ttatacactggtcaatatgtttcagcgcatccagtatcgtattatcaaaacaaattacaa
aacaagacttgcaaacctttcttctggcaaaaattatcaagtagctgcctatgtacacga
agtaaaatcaattag

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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