KEGG   Listeria monocytogenes SLCC5850 (serotype 1/2a): LMOSLCC5850_1379
Entry
LMOSLCC5850_1379  CDS       T02223                                 
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha chain, Gram-positive type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lmoc  Listeria monocytogenes SLCC5850 (serotype 1/2a)
Pathway
lmoc03030  DNA replication
lmoc03430  Mismatch repair
lmoc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMOSLCC5850_1379 (polC)
   03430 Mismatch repair
    LMOSLCC5850_1379 (polC)
   03440 Homologous recombination
    LMOSLCC5850_1379 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmoc03032]
    LMOSLCC5850_1379 (polC)
   03400 DNA repair and recombination proteins [BR:lmoc03400]
    LMOSLCC5850_1379 (polC)
Enzymes [BR:lmoc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMOSLCC5850_1379 (polC)
DNA replication proteins [BR:lmoc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LMOSLCC5850_1379 (polC)
DNA repair and recombination proteins [BR:lmoc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LMOSLCC5850_1379 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 RNase_H_2 Rv2179c-like DEDDh_C Peripla_BP_1
Other DBs
NCBI-ProteinID: CBY51848
Position
1348960..1353294
AA seq 1444 aa
MTAKEEEKQERFQLLMTQIGLQDVTTYEEFTKDAKIEKLVADKKNKTWQFHLHVPQIFPA
ALFHMMDVGMKRAFSQIAETEMQIVPENQTINETLIQDYWNLIVEPIGKQSPMIGKLLME
QKPTFKEPHFIEVAVHNDMEEATIQQRFQTKIIESYGKAGFPRLAMKMHMLDQSETDEYK
AFAQAKQEEDQKKAAEAVQVMQKRQAEGQSGGGGAAPLTGPFQIGYKIKDDEEVKRLGDI
YDEERRITVQGLIFATEIRELRSGRSLLQFKITDYTSSMIIKMFSRDNEDAAMFQNLKKG
MWVKVRGSVQNDTFVRDLIMMAQDVNEIAGVKRLDTAEEKRAELHLHSPMSQMDATSSVD
SLFKQAADWGHKAIAITDHSVAQSFPEAYGAGQKYGLKVIFGIEANLIDDGVPIAYNDQH
IALEDATYCVFDVETTGLSAVYDTIIELAGVKMKNGEIIDKFEAFIDPGHPLSATTINLT
GITDDMVKGSDPIDVVLKRFKEWSGDDILVAHNASFDMGFINTAYEKVGLEKAENAVVDT
LELARFLYPHFKNHRLNTLTKKFNIILEQHHRAVFDAEATAYLAWKLIKDAKEMHNIDFH
DSLNDYMGEGDAYKRARPFHATIYAQTAVGLKNLFKLITMSNINYFYRVPRIPRSQLKKL
REGLIIGTACSQGELFEAMMQKGMQAAEKVAEFYDFIEVQPKPVYAPLIERELVRDEKAL
EEILKNIVRVGEKTGKPVVATGNVHYKDPVDKIYRKILIHSQGGANPLNRAELPDVHFRT
TDEMLKEFAFLGEEKAKEIVVTNANLVVDWMENLKPIKDELYTPKIDGAEDEVRNMSYAM
AHQLYGEKLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSF
VATMTEITEVNPLPPHYLCPNCKDSEFFDDGSVGSGFDLPDKDCPHCGTAYQKEGQDIPF
ETFLGFKGDKVPDIDLNFSGDYQPVAHAYTKEIFGEDYVFRAGTIGTVAEKTAFGYVRNY
ERDMNMTIRGAEIDRLVAGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPVQFPADATDSEW
KTTHFDFHSIHDNVLKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPDVMKLFGSTESLG
VKPADIDSKTGTLGIPEFGTRFVRQMLEQTKPTTFSELVQISGLSHGTDVWLGNAEELIK
NKTCELPDVIGCRDDIMVFLIYQGLESSLAFKIMESVRKGKGLTDEMEEAMMANKVPLWY
IESCKKIKYMFPKAHAAAYVLMAVRIAYFKVHYPLYFYATYFTVRADDFDLTSMVNGKEA
VKATMKEVNDKGMEASTKEKNLLTVLEIANEMLARGFHFQKVDLYKSSADEFIIDGDSLI
PPFNAIPSLGTNVAKQIVAARENGEFLSKEDLQQRGKVSKTIIQYMDDQGCLEGLPDQNQ
LSLF
NT seq 4335 nt   +upstreamnt  +downstreamnt
atgactgcaaaagaggaagaaaaacaagaacgatttcagctgttaatgacacaaatcggt
ttacaagatgtaacaacctacgaagaatttacaaaagatgctaaaatcgaaaaactcgtt
gccgataagaaaaataaaacatggcaatttcatttacacgttccacaaatttttccagca
gcacttttccatatgatggatgttggaatgaaacgcgcattcagccaaatcgcggaaaca
gaaatgcaaattgttccagaaaatcaaacaatcaacgaaacgctcattcaagattattgg
aacttaatcgtagagccaattggaaagcagtcaccgatgattggaaagcttttaatggag
caaaaacctacatttaaagaaccccattttattgaagtagcagtccataatgacatggaa
gaagcgactattcagcaacgattccagacgaaaattattgaaagttatgggaaagctgga
tttccacgtctagcaatgaaaatgcacatgcttgaccagtctgaaacagatgaatataaa
gcttttgcacaggccaaacaagaagaagatcagaaaaaagccgctgaagctgtgcaagtt
atgcaaaaacgacaagcagaagggcaaagcggtggcggtggagcagctccactaacaggt
ccgttccaaattggttataaaattaaagacgatgaagaagttaaacgtcttggggatatt
tatgatgaagaacgacgtattacagttcaaggcttaatctttgcgacagaaattagagag
cttcgcagtggtcgtagtttgttacaattcaaaattaccgattatacaagttcaatgatt
ataaaaatgttttctcgtgataacgaggatgcggcgatgttccagaatttgaaaaaaggt
atgtgggttaaagttcgaggaagcgttcaaaacgatactttcgtgcgtgacttaatcatg
atggcgcaagatgtcaatgaaatcgctggagtgaagcgtcttgatactgctgaagaaaaa
cgcgcagaactacatcttcattcaccgatgagtcaaatggatgccacttcatctgttgat
tcactgttcaaacaagctgctgattggggacacaaagcaatcgctattactgatcattcc
gttgcccaatctttcccagaagcgtatggagcagggcaaaagtatggcttaaaagttatt
tttggcatcgaagcaaatctcatagatgatggcgtgccaatcgcttataacgatcaacat
attgctttggaagatgcaacatattgcgtatttgacgttgaaacaacaggtttatccgct
gtttatgatacgatcatcgaacttgctggcgtaaaaatgaaaaatggtgaaattattgat
aaatttgaagcttttattgatccaggacatccactttctgcaactactattaatttaact
ggtattacagatgacatggtaaaaggttctgatcccattgatgttgttttaaaacgattt
aaagaatggagcggtgatgatattcttgtggcccataatgcttcttttgacatgggtttt
attaacactgcttatgaaaaagttgggctagaaaaagcagaaaatgcagttgtcgataca
ttagaattagcacgttttctttacccacattttaagaatcaccgtttgaatacattaaca
aagaaatttaatattattcttgaacaacatcaccgggctgtatttgatgctgaggctaca
gcatatttagcttggaaattaattaaagatgcgaaagaaatgcacaacatcgatttccat
gattctttaaatgactatatgggagaaggcgacgcatacaagcgtgcgagaccattccac
gccacaatttacgcacaaacggctgttggtttgaagaatctctttaaattaattacgatg
tccaatattaattacttttaccgtgtgcctcgtattcctcgttctcagctaaagaaatta
cgtgaaggtttaattattggaactgcttgtagccaaggagaactatttgaagcaatgatg
caaaaagggatgcaagcggcagaaaaagtagcagagttctatgatttcattgaagttcaa
ccgaagccagtttatgcaccgcttattgaacgtgaactagttcgtgacgaaaaagcttta
gaagaaatattgaaaaatatcgtccgcgttggtgaaaaaactggaaaacctgtcgttgca
acaggtaatgtacattacaaagatccagtggataaaatttatcgtaaaattttaatccat
tcgcaaggaggagcaaatccgcttaatcgtgctgaattaccagatgttcatttccgtaca
acggatgaaatgttgaaagaatttgccttcttgggtgaagaaaaagcaaaagaaattgtt
gtaactaatgcgaatttagttgtcgattggatggaaaatcttaaaccaatcaaagacgaa
ttatacacgccgaagattgatggcgcagaagatgaagttcggaatatgagctatgcgatg
gcgcatcaactttacggtgagaaactgccagaaatcgtagaagctcgactagaaaaagaa
ctgaaaagtattatcggacacgggtttgcggttatttatctcatttcacataagcttgtt
aagaaatcacttgtagatggctatctagttggttcgcggggatcggtcggttcttctttc
gttgcgacaatgacggaaattaccgaagtaaacccacttccaccgcattatctttgcccg
aattgtaaggattctgagttctttgatgatggttcagttggttctggttttgacttacct
gacaaagattgcccacattgcggaactgcttatcaaaaagaaggacaagacattccattt
gaaactttcttaggatttaaaggggataaagtacctgatattgacttgaacttctcagga
gattatcaaccggtagcccatgcttatacaaaagaaatttttggtgaagattacgttttc
cgtgcggggacgattggtactgttgcagagaaaacagcttttggttatgttcgaaattat
gagcgagatatgaatatgactattcgcggggcagaaattgaccgacttgttgctggttgt
acaggcgttaaacgaactaccggacaacatccaggtggtattatcgttattccagattat
atggatgtttacgattttacaccggtacagttcccagctgatgcgacggactcagaatgg
aaaacgacccattttgactttcactcgattcatgataacgtattaaaactagatatactt
ggacacgatgatccgactgctatccggatgttacaggatttaagcggtattgatccaaaa
acaatcccaaccgatgatccagatgttatgaaactatttggatctacagagtcgcttggt
gttaaaccagcagatattgattcaaaaacaggaacattaggaatccccgaatttgggacg
cgttttgttcgacaaatgctagaacaaactaaaccaacaacattttctgagctagtgcaa
atctccggtctttcccacgggacggacgtttggcttggtaatgccgaagaattaatcaaa
aataaaacatgcgaactgccagatgtaattggttgtcgtgatgatattatggttttccta
atttatcaagggctagaaagttcattagcctttaagattatggagtctgtgcgtaaaggg
aaagggttaacagatgaaatggaagaagcaatgatggcgaataaagtaccgctttggtac
attgaatcttgtaaaaaaatcaagtacatgttccctaaagcccatgctgctgcttatgtt
ttaatggcagtacggattgcatatttcaaagtacattatccactatacttctatgcgact
tatttcaccgttcgtgccgacgattttgatttaacatcgatggtaaacggaaaagaagcc
gtgaaagcaacgatgaaggaagtaaacgataaaggaatggaagcttcaaccaaagagaaa
aacttattaactgttctagaaattgcgaatgaaatgcttgctcgtggtttccatttccaa
aaagtcgatttatataaatcgtctgctgatgagttcattattgacggagactcacttatt
ccaccattcaatgcgattccaagtcttggaaccaacgtagcaaaacaaatcgttgccgct
cgtgaaaatggagaatttttatccaaagaagacttgcaacaacgtggaaaagtgtcgaaa
acgattattcagtacatggatgatcaaggatgcttggaaggattgcctgatcaaaatcag
ttgtcactattctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system