KEGG   Listeria monocytogenes EGD (serotype 1/2a): LMON_0006
Entry
LMON_0006         CDS       T02872                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
lmod  Listeria monocytogenes EGD (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:lmod00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmod03032]
    LMON_0006 (gyrB)
   03400 DNA repair and recombination proteins [BR:lmod03400]
    LMON_0006 (gyrB)
Enzymes [BR:lmod01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LMON_0006 (gyrB)
DNA replication proteins [BR:lmod03032]
 Prokaryotic type
  DNA Topoisomerases
   LMON_0006 (gyrB)
DNA repair and recombination proteins [BR:lmod03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LMON_0006 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 TOPRIM_C GyrB_hook
Other DBs
NCBI-ProteinID: CDG43879
UniProt: A0A3Q0NAB0
Position
6031..7971
AA seq 646 aa
MSEENITNVQENASDYNEDQIQVLEGLEAVRKRPGMYIGSTSQRGLHHLVWEIVDNAIDE
ALAGFCTEIEITIEADNSITVRDNGRGIPTGINEKIGRPTVEVIFTVLHAGGKFGGGGYK
VSGGLHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDVVMDMEEQGETDYRGTIVHFT
PDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISIEDKREEHKVRKDFHYEGGIRSYVEH
LNKAKDVIHEPPIYLEGERDDIMVEISMQYNTGFSSNIISFANNIHTYEGGTHESGFKTA
LTRVINDYARRNKLFKDSDDNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARSI
TDKLFSEALNKFMMENPDVAKKIVEKGVVASRARLAAKRAREVARKSSGLEISSLPGKLA
DCSSRNPEISELYIVEGDSAGGSAKQGRDRLFQAILPIRGKILNVEKARLDRILANEEIR
TIFTAMGTGFGGDFDVSKSRYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPLLDAGYIYI
AQPPLYQIKHGKQIEYVYSDGQLEDYLASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPE
HRTLLQVNIKDAIDADETFEMLMGDRVEPRRKFIEDNAQYVKNLDV
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgtcagaagaaaatattacaaatgtacaagaaaatgcttcagattataacgaagatcaa
atacaagtactggaaggcctagaggcagtaagaaaaagacccggtatgtacattggttca
actagccaacgcgggctccatcaccttgtatgggaaattgttgataatgcaattgatgaa
gcacttgctggtttttgtacagaaattgaaattacaatcgaagctgataacagcattact
gttcgtgataacggacgtgggattcctactgggattaatgaaaaaattggtcgtccaaca
gtagaagttatctttaccgttctgcatgctggtggtaaatttggcggcggcggatataaa
gtatctggcggacttcacggagttggtgcatcggtagttaatgccctttccacatctctt
gaagtatacgttcaccgtgaaggtcaaaaatattaccaacgctttgaacgtggtgatgta
gtaatggatatggaagaacaaggcgaaacggattaccgtggaacaattgttcactttacg
ccagatccacaaattttcacagaaacaacggaattcgattttgatacacttcgtactcgt
acgcgcgaacttgctttcttgaatcgtggtttaacgatttcaattgaagataagcgcgaa
gaacacaaagttcgtaaagatttccactatgaaggcggaattcgttcttacgtggagcat
ttaaataaagcaaaagacgttatccatgagccaccaatttatttggaaggtgaacgcgat
gatattatggttgagatttccatgcaatataatactggattctcaagcaacatcatttca
ttcgcaaataacattcatacgtatgaaggcggaactcacgaatctggctttaaaacggcg
ttaacacgtgttattaatgactacgcgcgtcgtaataaattgtttaaagatagtgatgac
aatctttctggtgaagatgttcgtgaaggtttaacggcgattatttctatcaaacaccca
gatccacagtttgaaggacaaaccaaaacaaaacttggaaattcagaagcccgttcaatc
acggataagctattttctgaggctttaaataaatttatgatggaaaacccagatgttgct
aaaaaaatcgttgagaaaggcgttgtggcttctcgtgcacgtctggctgctaagcgcgcg
cgtgaagttgctcgtaaaagcagtgggctagaaatttctagcttgccaggtaaattagct
gactgttcttcccgtaatcctgaaatcagcgaactttacatcgttgagggtgactcagct
ggtggttcagctaaacaaggtcgtgaccgtttattccaagcgattttgccgattcgtggt
aaaattttgaacgtggaaaaagcacgtttagaccgtattctagctaacgaagaaattcga
actatttttacagcgatgggtactggttttggtggcgattttgacgtttctaaatctcgt
taccacaaattaattattatgactgatgccgatgttgatggtgcacatattcgtacacta
cttcttacactattttatcgttatatgcgtccactgcttgatgctggttatatctatatt
gcgcaaccaccgctttaccaaattaagcatggtaaacaaatagaatatgtatacagcgac
ggacagttagaagactatctggcttcccttgacggagacactaaatacagcattcaacga
tataaaggtcttggagaaatgaacccagaacaactttgggatacaacaatgaatccggaa
caccgtacactacttcaagtcaatatcaaagacgctattgatgccgatgaaacttttgaa
atgttgatgggtgaccgcgtggaacctcgtcgtaaattcatcgaagacaacgcacaatac
gttaaaaacttggatgtttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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