KEGG   Listeria monocytogenes serotype 4b LL195: BN389_15340
Entry
BN389_15340       CDS       T02416                                 
Name
(GenBank) Putative helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
lmog  Listeria monocytogenes serotype 4b LL195
Pathway
lmog03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmog00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BN389_15340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmog03400]
    BN389_15340
Enzymes [BR:lmog01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BN389_15340
DNA repair and recombination proteins [BR:lmog03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BN389_15340
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 SH3_13 UvrD_C_2 AAA_11 Viral_helicase1 AAA_22 AAA_16 UvrD-helicase AAA_12 nSTAND3 AAA_28 NTPase_1 Zeta_toxin AAA_17 AAA JIP_LZII SLFN-g3_helicase TsaE AAA_18 T2SSE DEAD ABC_tran
Other DBs
NCBI-ProteinID: CCO64108
UniProt: A0A0E1R729
Position
complement(1519681..1522077)
AA seq 798 aa
MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFF
PALHEQEVYTFYGKMQEHAKFGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAEN
IVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRENQGLEHVMVGLNEYGFGPQL
SMKIFQAYKQNAIEVLENNPYKLIEDIKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQNILVAQVEKLAEEQKIITENTRVYM
PSLYYSESGFAYHVKRMLKQTEYQEQFPQSEFLLALGELEERIGVHYGDSQRQALEQALM
SPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDGATFPVLLAAPTGRAAKRMS
ESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPAD
FTKNSADRSFFHCTVNQIGDVVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQ
EIFNPNDTGRRKEVQFGDIKYRVHDKVLQLINQPEKNVFNGDIGEIVSIIYAKENTEKQD
LIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGIERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITE
IDPMIGMEGITPEQFMAG
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggctgaacaagaatcactcgctctatttaacgatacaccagaagaacttttcatgaag
ggcacgatgttgtccaccattttttacaatgccgaaaacctcttttctgttgtacgaata
ttggtcaaagaaaccaatgcggattgggacgaaaaagatattatcgtaaccggttttttc
ccagcgcttcacgagcaagaagtatacactttctacgggaaaatgcaggaacatgctaaa
tttggtcaacagtttaaagcagaccggtttcgtaaggaaatgccacaatcacgagcgggc
ttaattaattatctatccggtgaactttttaaaggcattggtaaagtcactgctgaaaat
attgtggatacgattggcgacgatgctatcacaaaaattttatccgatccgagcttgcta
aatacagtacctaagttgccatctggcgcggcagaaagtttgcttgcttcccttagagaa
aatcaagggttggagcatgtgatggtcggattaaacgaatatggctttggtccgcaatta
tccatgaaaattttccaggcctataaacaaaatgcgattgaagtgttagagaataatcct
tataaattgattgaggatataaaagggattggttttcagcgtgccgatgagcttggacgg
aaactcggtcttggcgggaatcatccagaacggcttcgtgctgggattttatttatgtta
gattcggtttgtatgcaacaaggtcatgtatatatggagcaagaggttctgctcggagaa
gtaacttatttactggaagaaagcgaaggcattcgtattgaccaaaatattttagtagct
caagtagaaaaattagctgaggaacaaaagattattacggaaaatacacgtgtttacatg
ccatcactctattattcagagagcggctttgcatatcacgtgaagcgaatgcttaaacaa
acagaataccaagaacaatttccgcaatccgaatttctgctagctctaggagaattagaa
gaacggattggcgttcactacggagattcgcagcgacaggctttagaacaagctttaatg
tctccgatgctcgtacttactggtggtcccgggacagggaaaacaacagtcattaaaggg
atagtggagctttatgcggaactaaatggtgtgagccttgatccccatgcttacaaagat
ggagcgactttccccgttcttcttgctgctccaactggccgtgccgctaaacggatgtct
gagtcaacagggcttcctgcgatgaccattcaccgtttacttggaatgaatggtcaagaa
caaatggatgatgatgcagaaagactgattgatggacgactgttgatagtggatgagatg
tcaatggtagatatttggcttgctaatcaattattccgtgctttaccagcgcacatgcaa
gtggtacttgttggcgaccaagatcagttgccttcagtcggaccaggtcaagtactcaaa
gatattctgcaatctgaacaaattccaactgtagctctttcagatatttaccgccaaaag
gatggttcttccattatcgaaatggcgcattatataaaagaaggcatgttgccagctgat
ttcaccaaaaatagcgccgatcgctccttttttcattgcacggtaaatcaaattggtgat
gtagtcgaacaagtggtaaaaaatgcaaaaaacaaaggatttcgagcaaaagacatccaa
gttttagcaccaatgtatcgtggtcctgcaggcattgatattttaaataaaaaactacaa
gaaattttcaatccaaatgatacagggcgtcgtaaagaagttcaatttggtgacataaag
tatcgcgtgcatgacaaagtactgcaattgattaatcaaccagagaaaaatgtgtttaac
ggtgatattggtgaaattgtgtctattatatacgccaaagaaaataccgaaaaacaagat
ctgattgtcgttcaatttgaccaaacagaggtttcttactataggcaagaatttaatcaa
ttgacccatgcttattgttgttcgatccataaagcgcagggaagtgaatttccgattgtg
attatgccgattgtccgcagttactaccggatgttacggcgcgatttattatacaccgga
gtaacgcgaagtaaacaatttctcattctttgcggggaagaagaagcttttcgaatgggg
atagaacgaattgatgaaaataaacgtaatacaacactctctgaacgtttaatgagcgaa
gatgttttattagaacaaatgacaaataaacgaattctcacagctgaaaatattacggaa
attgatccgatgattggaatggaagggattactccagaacaatttatggcaggataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (34)   

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