KEGG   Listeria monocytogenes serotype 4b LL195: BN389_15900
Entry
BN389_15900       CDS       T02416                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lmog  Listeria monocytogenes serotype 4b LL195
Pathway
lmog03030  DNA replication
lmog03410  Base excision repair
lmog03420  Nucleotide excision repair
lmog03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmog00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BN389_15900 (polA)
   03410 Base excision repair
    BN389_15900 (polA)
   03420 Nucleotide excision repair
    BN389_15900 (polA)
   03440 Homologous recombination
    BN389_15900 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmog03032]
    BN389_15900 (polA)
   03400 DNA repair and recombination proteins [BR:lmog03400]
    BN389_15900 (polA)
Enzymes [BR:lmog01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BN389_15900 (polA)
DNA replication proteins [BR:lmog03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BN389_15900 (polA)
DNA repair and recombination proteins [BR:lmog03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BN389_15900 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BN389_15900 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 Enkurin LTD HHH_2 XPG_I FeoB_N
Other DBs
NCBI-ProteinID: CCO64164
UniProt: A0A0E1R6L0
Position
complement(1581526..1584183)
AA seq 885 aa
MNDNIEEDIPVNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKP
SHVLVAFDAGKTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEAD
DIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNL
TPEQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKV
LENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTP
EETKELKELSFEIVTELKEKHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKET
AESSEVFRKWVESDQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFT
SVAIRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKAVAIADLEKRLVDDLEENEQL
ALMEDLELPLTFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEEFNINSP
KQLGVILFEKLGLPAVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGL
LKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFS
ADYSQVELRVLAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFG
IVYGISDYGLSQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRR
YIPEIVSRNFNVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLEAKLLLQVHDE
LIFEAPEAEIAKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq 2658 nt   +upstreamnt  +downstreamnt
gtgaatgacaatatcgaggaggatatccctgtgaataaattagtattaattgatggaaat
agtattgcgaatcgcgccttttatgctttaccgcttttaaataatgataaaggtgtttac
acaaatgcggtgtatggtttcgcaatgatgttgatgaatgtactcgaaaaagaaaaacct
agccatgtgctcgttgcatttgatgctggaaaaacaactttcaggcatacaacatttaaa
ggttataaaggcggacgtcaaaaaaccccaagtgagttatctgaacagtttccattcatc
cgagaacttttaacggcgtatgatatcccgcaatatgaacttgccaattacgaggcagat
gatattatcggaacattgacgaaaaaagcagaagcagatggaatggaagtagcaatcatt
accggagaccgcgacttaacgcaattagcttctgaaaaaacaacggtttatattactaaa
aaaggcatagccgatatggaaaccaacacaccagaaacactaaaagaaaaatacaatctg
actcctgaacaaatcattgatatgaaaggcttaatgggtgattcctccgataatattcct
ggtattccaggcgttggtgaaaaaactgccttaaaactcttacatgaatttggtggaacg
gtggaaagtgtgttagagcatgccgaggaaatttccggtaaaaaactaaaagaaaaagta
ctggaaaataaagaattagctattttaagtaaagagttagctacaatcaatgtggattca
ccgattgaatgcacggtcgaaagcacgaaatacgacggctatcaaacagaaaaagttatc
cctttattaaaagaaatgaattttacaacacttttgaaaaatatcgagggagatacacca
gaagaaacgaaagaactaaaagagttgtcttttgaaatcgtaacagaattaaaagaaaaa
cattttggtgggaaaaccgcgctttatgtggagctagaaaacgataattaccatacagct
aatttcattggattaacagtacattctagccaagggacgtatttctttacaaaagaaaca
gccgaaagtagtgaggtattccgcaaatgggtagaaagtgatcaaacaaaagtagtgtac
gatgcgaagaaaacaatggttgcaatgaaccgcattggtttggccatttctggtatcacc
tttgatatcatgttagcatcttacttgctaaatccatctgattcgattgatgactttaca
agtgttgcaatacgacatgattacacagaagtagaaacagatgaagcagtctacggaaaa
ggtgctaaacgtagcactcctgaagaaagcattgttgcggcacacttagctagaaaagca
gtggctattgctgacttagagaaaagactagttgatgatttagaagaaaatgaacaacta
gctttgatggaagaccttgagctacctctaacttttgtattagcagaaatggaaatgcaa
ggggttagtgtagatacagaacgtctagagaatatgaaagtggagctagcgggtagactg
aaaacattggaagagtcgatccattctctagccggcgaagaattcaatattaattcaccg
aaacaactaggtgtgattttatttgaaaagcttggtctcccagctgtcaagaaaacaaaa
acaggttattcaacggctgccgatgtactggaaagtttatctggtaaacacgcgattatt
gatgaaattttgttatatcgtcaacttggtaaaattcagtccacttatatcgaagggctg
cttaaagtgacagataaagaaacacataaagtacacacacgtttcaaccaaacattaacg
caaacaggacgcttaagttcagttgatccgaacttgcaaaatatccctattcgtttagaa
gaaggacggaaaattagacaagttttcgtaccgagtaaaccaggttggaaaatgttttca
gccgattattctcaagtagagctgagagtcttagcacatatttcggaagatgaaaattta
atttatgcatttaagcacgattatgatattcatacgaaaacggcgatggacgtgtttcat
gttgagcaagacgaagtggattcattaatgcgtcgtcaggctaaagcggtaaactttggt
attgtatatggaattagtgattatgggctttcgcaaaatcttggtattacgcgtaaagaa
gcaaaagactttattgatcgttattttgtgagctatccagccgtgaaagaatatatgcaa
gacatcgttcgttttgcgaaagaaaaaggctatgtagagaccattttacatcgtcgtcgg
tatattccagagattgtcagtcgtaattttaatgttcgcggatttgcagaaagaacggcg
atgaacacgcctattcaaggtagtgccgctgatattatcaaaaaagcgatgattctgatg
agcgagcgtttagtatctgaaaaattagaagcaaaattattactacaagtacacgatgaa
ttaatcttcgaggcgcctgaagctgaaatcgctaaattagaagaaattgtcccagatgtt
atggaaaatgcagtagagctttctgtaccgctaaaagtagatagcgcatttggtgacact
tggtacgacgcgaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

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