KEGG   Listeria monocytogenes Lm60 (serotype 1/2a): IJ09_11750
Entry
IJ09_11750        CDS       T03479                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
lmom  Listeria monocytogenes Lm60 (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:lmom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lmom03016]
    IJ09_11750
Enzymes [BR:lmom01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     IJ09_11750
Transfer RNA biogenesis [BR:lmom03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    IJ09_11750
 Prokaryotic type
    IJ09_11750
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344 DUF3394
Other DBs
NCBI-ProteinID: AIL68439
UniProt: A0A3R0H3U5
Position
2308524..2309270
AA seq 248 aa
MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTVRVTASGRTDTGVHAKG
QVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHARFGTVGKEYRYVVKRTKI
FDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSARTERDSKVRTLYSIDFYEED
DETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDISEALLARDRQKLISKTAPPQGL
YLWRVDYE
NT seq 747 nt   +upstreamnt  +downstreamnt
atgacaagatataaagcgataatttcttatgatggtagtgggttttatggctatcaggtg
cagccgaatacacgtacggtccaagcggaaattgaaaaagcactgacaaaaatgcataaa
ggtaagactgtgcgggttacagcatcgggaagaacagatactggtgttcatgcgaaaggt
caggttattcatttcgattcggaactggatatcactgccgaaaaattccaaaaagcttta
caagtcatgaccccgtttgatattagctttttaacagtggaagaagtaccagacgatttc
catgctagatttggcacggtcggaaaagaatatcgttatgtggtaaaacggacgaaaatt
tttgatccttttagtcggaattttgcgctacattatccgtatgaactggatatttcaaaa
atgaaattggcgagtaaacgcctgattggcgagcatgattttactagcttctgttcggcg
agaacggagcgggattctaaagtccggacgctttatagtattgatttttatgaagaggac
gatgagacgttagtgattgcttttcaagggaatggctttttgtataatatggtccgaatt
ttgacgggaactttgctcgatgcagggcaaggtcgaatttctccggatgatattagtgag
gctttattagcacgtgataggcaaaaattaattagtaaaactgcgccgccacaagggtta
tatttatggcgagtggactatgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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