KEGG   Listeria monocytogenes SLCC2378 (serotype 4e): LMOSLCC2378_1309
Entry
LMOSLCC2378_1309  CDS       T02240                                 
Symbol
hfq
Name
(GenBank) host factor-1 protein
  KO
K03666  host factor-I protein
Organism
lmoo  Listeria monocytogenes SLCC2378 (serotype 4e)
Pathway
lmoo02024  Quorum sensing
lmoo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmoo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMOSLCC2378_1309 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LMOSLCC2378_1309 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmoo03019]
    LMOSLCC2378_1309 (hfq)
   03036 Chromosome and associated proteins [BR:lmoo03036]
    LMOSLCC2378_1309 (hfq)
Messenger RNA biogenesis [BR:lmoo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LMOSLCC2378_1309 (hfq)
Chromosome and associated proteins [BR:lmoo03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LMOSLCC2378_1309 (hfq)
SSDB
Motif
Pfam: Hfq LSM DUF5608
Other DBs
NCBI-ProteinID: CBY73076
Position
1305004..1305237
AA seq 77 aa
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHA
ISTFSPQKNVALNPDAE
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaaacaaggtggacaagggttacaggactattacttaaatcaattgcgtaaggaaaaa
attcttgcaactgtatttttaacaaatggttttcagttaagaggacgtgttgtaagtttt
gacaattttaccgtactactagatgtcgaaggaaaacaacagcttgtatttaaacacgca
atttcaactttctccccgcagaagaatgtcgctttaaatcctgatgcggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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