KEGG   Listeria monocytogenes SLCC7179 (serotype 3a): LMOSLCC7179_0249
Entry
LMOSLCC7179_0249  CDS       T02224                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
lmos  Listeria monocytogenes SLCC7179 (serotype 3a)
Pathway
lmos03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LMOSLCC7179_0249 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmos03021]
    LMOSLCC7179_0249 (rpoB)
   03400 DNA repair and recombination proteins [BR:lmos03400]
    LMOSLCC7179_0249 (rpoB)
Enzymes [BR:lmos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LMOSLCC7179_0249 (rpoB)
Transcription machinery [BR:lmos03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LMOSLCC7179_0249 (rpoB)
DNA repair and recombination proteins [BR:lmos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LMOSLCC7179_0249 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: CBY59455
Position
266989..270543
AA seq 1184 aa
MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFLDEGLREMFRDISPIED
FAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLINKETGEVKDQEVFMGDFP
LMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKGFGSTVIPNRGAWLEYETDAK
DVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNDYLRNTLEKDNTDNAEKALLEIY
ERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRYKINKKLHLKNRLFNQTLAETLVDP
ETGEIIASKGDILDRRNLDQIIPNLENGVGFRTLRPTDGVMEDSVLVQSIKIYAPNDEEK
EINIIGNAYIEENVKHITPSDIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVRERMSIQDMTTITPQQLINIRPVVASIKEFFGSSQLSQFMDQTNPLGE
LTHKRRLSALGPGGLTRERAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNK
FGFIETPYRRVDPETNRVTDKIDYLTADEEDNYVVAQANSKLDEQGTFTEEEVMARFRSE
NLAVEKERIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVG
TGMEHVSAKDSGAAVTAKHDGIVEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSN
QGTCYNQRPNVAEGDRVVKGEILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSE
RLVKDDVYTSIHIEEFESEARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDN
DLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGD
ELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNP
LGVPSRMNIGQVLELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYD
GRSGEAFDNRISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLG
MDVKMLSADEEEIEMRDMDDDDFTNQNDAFNIVQPENAAAEKTE
NT seq 3555 nt   +upstreamnt  +downstreamnt
ttgtcaggacattcaggacatgatgtaaaatatggacggcatcgtacgcgtagaagtttt
gcgcgaatcagtgaagtacttgaattaccaaacttaattgagattcaaacagcttcttac
caatggttcttagatgaagggctacgtgagatgttccgcgatatttcgccaattgaggat
tttgcgggtaatttatctttagaattcattgattacgatcttggagagccgaaatattcg
gtagaagaatctaagaaccgtgatgcaaactatgcggctccactgcgcgtgaagttgcgc
ctaatcaacaaagaaaccggcgaagtaaaagaccaagaagtatttatgggtgatttccca
ctaatgactgaaatgggtacgttcattattaatggggcagaacgtgttatcgtttcccag
ttagttcgttctccaggtgtttacttcaatggaaaactagacaaaaatggtaaaaaaggc
tttggttctactgtcatccctaaccgtggggcttggcttgagtatgaaacagatgctaaa
gacgttgtacacgttcgtattgaccgtacacgtaaattaccagtaactgttttacttcgt
gcactaggctttggttccgatcaagaaattattgatttaatcggggacaatgactacttg
cgcaacacgcttgaaaaagacaacactgacaatgctgaaaaagcacttctagaaatttac
gaaagattacgtccgggtgaacccccaacagttgataacgctagaagcttactagtttct
cgtttctttgatccaaaacgctacgatcttgcaagcgttggacgttataaaatcaacaaa
aaattacatctaaaaaaccgtctattcaaccaaacattagcagaaactttagtggatcca
gaaactggtgaaattatcgcttctaaaggtgacatattggatcgtcgtaatttagatcaa
attattcctaatttagaaaacggtgtaggtttccgcacacttcgtccaactgatggagtg
atggaagatagcgtactcgttcaatctattaaaatttacgcaccaaatgatgaagaaaaa
gaaatcaacatcatcggtaacgcgtatatcgaagaaaacgtaaaacacatcacgccttct
gatattatttcatccattagctacttctttaacttgctacatggtgttggcgatacagat
gacatcgatcacctaggtaatcgtcgtcttcgttctgttggtgaacttttacaaaaccaa
ttccgtatcggtttatctcgtatggaacgtgtggttcgtgaacgtatgtctattcaagat
atgactacaattacaccacaacaattgattaatattcgtccagtagttgcatctatcaaa
gaattctttggtagctcgcagttatctcagttcatggatcaaacaaatccacttggcgaa
cttacgcataaacgtcgtctttcagcgcttggacctggtggtttgacgcgtgaacgtgct
ggttatgaagtacgtgacgtgcattactctcactatggccgtatgtgtccgattgaaacg
ccagagggaccaaacattggtttgattaactccctttcttctttcgcaaaagtaaataaa
tttggctttatcgaaacgccttaccgccgcgtagatcctgaaacaaaccgtgttacagat
aaaattgattatctaactgcggatgaagaggataattacgtagtagcgcaagcgaactcg
aaattagacgaacaaggtactttcacagaagaagaagttatggctcgtttccgttcagaa
aacttagcggtagaaaaagaacgtattgactacatggacgtatcgcctaaacaggttgta
tctgttgcgacagcatgtattccgttccttgaaaacgatgatagtaaccgtgcgctaatg
ggagcgaacatgcaacgtcaagcagtacctcttatgcaccctgaagctccatttgttgga
acaggtatggaacacgtatctgcgaaagactctggtgctgctgtaactgccaaacatgat
ggtattgtagaacacgttgaagctcgcgaaatctgggttcgtcgtgtatctctagtggat
ggcaaagaagtaactggcggaatcgataaatatactttacgtaaatttgttcgttctaac
caaggtacttgttataaccaacgtccaaacgtagcagaaggagaccgcgttgttaaagga
gaaatccttggtaacggtccatctatggattccggtgaacttgcacttggtcgtaacgta
ctagttgcgttcatgacttgggatggttataactacgaggatgcgatcatcatgagtgaa
cgtcttgtaaaagatgacgtttatacttcgattcatattgaagaattcgaatcagaagct
cgtgatacaaaactcggacctgaagaaatgactcgtgatattccaaatgttggggaagac
gctttacgcgaccttgacgagcgtggaattatccgtgtcggtgcggaagtaaaagacaac
gaccttctagttggtaaagtaacaccaaaaggagttactgaattaactgcagaagaacgt
ttattacacgctatctttggtgaaaaagcacgtgaagttcgtgatacttcattacgtgta
cctcacggcggcggcggaatcgtgcttgacgtgaagatctttacacgtgaagcaggcgac
gaactaccacctggagtaaaccaattagtacgtgtttatattgtacaaaaacgtaaaatc
catgaaggcgataaaatggccggacgtcacggtaacaaaggggttatctcccgtatttta
cctgaagaagatatgccatttatgccagacggaacacctgttgatatcatgcttaaccca
ctaggggtaccatctcgtatgaatattggacaagtactagagctacacttaggtatggct
gctcgtgctttaggaattcacgttgcaacaccagtatttgatggtgcgaatgaagaagac
gtttggagcacagtggaagaagccggtatggcccgcgatgcaaaaacaattctttatgac
ggacgttctggtgaagcattcgataaccgtatctctgttggtgtaatgtacatgatcaaa
cttgcccacatggttgatgataaacttcatgcgcgttcaactggaccttactctctagta
acgcaacaaccgcttggcggtaaagcacaatttggtggacaacgttttggggaaatggaa
gtatgggcactggaagcttatggtgctgcttatacacttcaagaaatcctaacgattaaa
tccgatgacgtggttggtcgtgtgaaaacttacgaagcgattgttaaaggcgaaagcgtt
ccagaacctggtgtgccagaatccttcaaagtactcatcaaagagcttcaaagtcttgga
atggacgttaaaatgctttccgcagacgaagaagaaatcgagatgcgtgacatggatgat
gacgactttactaatcaaaatgatgccttcaatatcgtacaaccggaaaatgcagccgct
gaaaagactgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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