KEGG   Listeria monocytogenes WSLC1042 (serotype 4b): AX24_04055
Entry
AX24_04055        CDS       T03151                                 
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
lmox  Listeria monocytogenes WSLC1042 (serotype 4b)
Pathway
lmox03030  DNA replication
lmox03430  Mismatch repair
lmox03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmox00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AX24_04055 (polC)
   03430 Mismatch repair
    AX24_04055 (polC)
   03440 Homologous recombination
    AX24_04055 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmox03032]
    AX24_04055 (polC)
   03400 DNA repair and recombination proteins [BR:lmox03400]
    AX24_04055 (polC)
Enzymes [BR:lmox01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AX24_04055 (polC)
DNA replication proteins [BR:lmox03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AX24_04055 (polC)
DNA repair and recombination proteins [BR:lmox03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AX24_04055 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 RNase_H_2 Rv2179c-like DEDDh_C Peripla_BP_1
Other DBs
NCBI-ProteinID: AHJ35386
Position
736380..740714
AA seq 1444 aa
MTAKEEEKQERFQLLMTQIGLQDVTTYEEFTKDAKIEKLVADKKNKTWQFHLHVPQIFPA
ALFHMMDVGMKRAFSQIAETEMQIVPENQTIDETLIQDYWNLIVEPIGKQSPMIGKLLME
QKPTFKEPHFIEVAVHNDMEEATIQQRFQTKIIESYGKAGFPRLAMKMHLLDQSETEEYK
AFALAKQEEDQKKAAEAVQVMQKRQAEGQSGGGGAAPLTGPFQIGYKIKDDEEVKRLGDI
YDEERRITVQGLIFATEIRELRSGRSLLQFKITDYTSSMIIKMFSRDNEDAAMFQNLKKG
MWVKVRGSVQNDTFVRDLIMMAQDVNEIAGVKRLDTAEEKRAELHLHSPMSQMDATSSVD
SLFKQAADWGHKAIAITDHSVAQSFPEAYGAGQKYGLKVIFGIEANLIDDGVPIAYNDQH
IALEDATYCVFDVETTGLSAVYDTIIELAGVKMKNGEIIDKFEAFIDPGHPLSATTINLT
GITDDMVKGSDPIDVVLKRFKEWSGDDILVAHNASFDMGFINTAYEKVGLEKAENAVVDT
LELARFLYPHFKNHRLNTLTKKFNIILEQHHRAVFDAEATAYLAWKLIKDAKEMHNIDFH
DSLNDYMGEGDAYKRARPFHATIYAQTAVGLKNLFKLITMSNINYFYRVPRIPRSQLKKL
REGLIIGTACSQGELFEAMMQKGMQAAEKVAEFYDFIEVQPKPVYAPLIERELVRDEKAL
EEILKNIVRVGEKTGKPVVATGNVHYKDPVDKIYRKILIHSQGGANPLNRAELPDVHFRT
TDEMLKEFAFLGEEKAKEIVVTNANLVVDWMEDLKPIKDELYTPKIDGAEDEVRNMSYAM
AHQLYGEKLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSF
VATMTEITEVNPLPPHYLCPNCKDSEFFDDGSVGSGFDLPDKDCPHCGTPYQKEGQDIPF
ETFLGFKGDKVPDIDLNFSGDYQPVAHAYTKEIFGEDYVFRAGTIGTVAEKTAFGYVRNY
ERDMNMTIRGAEIDRLVAGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPVQFPADATDSEW
KTTHFDFHSIHDNVLKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPDVMKLFGSTESLG
VKPADIDSKTGTLGIPEFGTRFVRQMLEQTKPTTFSELVQISGLSHGTDVWLGNAEELIK
NKTCELPDVIGCRDDIMVFLIYQGLESSLAFKIMESVRKGKGLTEEMEEAMMANKVPLWY
IESCKKIKYMFPKAHAAAYVLMAVRIAYFKVHYPLYFYATYFTVRADDFDLTSMVNGKEA
VKATMKEVNDKGMEASTKEKNLLTVLEIANEMLARGFHFQKVDLYKSSADEFIIDGDSLI
PPFNAIPSLGTNVAKQIVAARENGEFLSKEDLQQRGKVSKTIIQYMDDQGCLEGLPDQNQ
LSLF
NT seq 4335 nt   +upstreamnt  +downstreamnt
atgactgcaaaagaggaagaaaaacaagaacgatttcagctgttaatgacacaaatcggt
ttacaagatgtaacaacttacgaagaatttacaaaagatgctaaaatcgaaaaactcgtt
gccgacaagaaaaataaaacatggcaatttcatttacacgttccacaaatttttccagca
gcacttttccatatgatggatgttggaatgaagcgtgcgttcagccaaattgcggaaaca
gaaatgcaaattgttccagaaaatcaaacaattgacgaaacactcattcaggattattgg
aacttaatcgtagagccaattgggaagcagtcaccgatgattggaaagcttttaatggag
caaaaacctacatttaaagaacctcattttattgaagtagcggttcataatgacatggaa
gaagcgactattcagcaacgattccagacgaaaattattgaaagttacgggaaagctgga
tttccacgccttgccatgaaaatgcacttgcttgaccagtctgaaacagaggaatataaa
gcttttgcactggccaaacaagaagaagatcagaaaaaagccgctgaagctgtgcaagtt
atgcaaaaacgacaagcagaagggcaaagcggtggcggtggagctgctccactaactggt
ccgttccaaattggttataaaattaaagacgatgaagaagttaaacgtcttggggacatt
tatgatgaggagcgacgtattaccgttcaaggcttaatcttcgcgacagaaattagagag
cttcgcagtggtcgtagtttgttacaattcaaaattactgattatacaagttcaatgatt
ataaaaatgttttctcgtgataacgaggatgcggcgatgttccagaatttgaaaaaaggt
atgtgggttaaagttagaggaagcgttcaaaacgatactttcgtgcgggacttaatcatg
atggcgcaagatgtcaatgaaatcgctggagtgaagcgtcttgatactgctgaagaaaaa
cgcgcagaactacatcttcattctccaatgagtcaaatggatgccacttcatctgttgat
tcactgttcaaacaagctgctgattggggacataaagcgattgctattactgatcactct
gttgcccaatctttcccagaagcgtatggagcagggcaaaagtatggcttaaaggttatt
tttggcatcgaagcaaatcttatagatgatggtgtgccaatcgcttataacgatcaacat
attgctttggaagatgcaacatattgcgtatttgacgttgaaacaacaggtttatccgcc
gtttatgatacgattatcgaacttgctggcgtaaaaatgaaaaatggtgaaattattgat
aaatttgaagcttttattgatcctggacacccgctttctgcaaccactattaatttaact
ggtattacagatgacatggtaaaaggttctgatccaattgatgttgttttaaaaagattt
aaagaatggagcggtgatgatattcttgtggcccataatgcttcttttgacatgggtttt
attaacactgcttatgaaaaagttggactagaaaaagcagaaaatgcggttgtcgataca
ttagaattagcacgttttctttacccacattttaaaaatcaccgcttgaatactttgaca
aagaaattcaatattattcttgaacaacatcaccgggctgtttttgatgcggaagctaca
gcgtatttggcttggaagttaattaaagatgcgaaagaaatgcacaacatcgattttcac
gattctttaaatgactatatgggagaaggcgacgcatacaagcgcgcgcgaccattccac
gccacaatttacgcacaaacggctgttggtttgaagaatctctttaaattaattacgatg
tccaatattaattacttttaccgggtaccacgtattcctcgctcgcagctaaaaaaatta
cgcgaaggcttaattattggaactgcttgtagccaaggagaattatttgaagcaatgatg
caaaaagggatgcaagctgcagaaaaagtagcggagttctatgatttcattgaagttcaa
ccgaagccagtttatgcaccgcttattgaacgtgaactagttcgtgacgaaaaagcttta
gaagaaatattgaaaaatatcgtccgcgtcggtgagaaaactggaaaacctgtcgttgca
acaggtaatgtacattacaaagatccagtggataaaatttatcgtaaaattttaatccat
tcgcaaggaggagcaaatccgcttaatcgggctgaattacctgatgttcatttccgtaca
acggatgaaatgttgaaagaatttgccttccttggtgaagaaaaagcaaaagaaattgtt
gtaactaatgcgaatttagtcgttgattggatggaagaccttaaaccaatcaaagacgaa
ttatatacaccaaaaattgatggtgcagaagacgaagttcgaaatatgagttatgcgatg
gcacatcaactttatggtgagaaactgccagaaatcgtggaagctagactagaaaaagag
ctgaaaagtattatcggccatggtttcgcagttatttatctcatttcacataagcttgtt
aagaaatcacttgtagatggctatctggttggttcgcggggatcggtcggttcttctttc
gttgctacaatgacggaaattaccgaagtaaacccacttccaccacattatctttgcccg
aattgtaaggattctgagttctttgatgatggttcggttggttctggttttgacttaccg
gataaagattgcccgcactgcggaaccccttatcaaaaagaaggccaagatattcctttc
gaaactttcttaggatttaaaggggataaagtacccgatattgacttgaacttctcaggg
gattatcaaccggtagcccatgcttatacaaaagaaatttttggtgaggattacgttttc
cgtgcggggacgattggtaccgttgcagagaaaaccgcttttggttatgttcgaaattat
gaacgcgatatgaatatgactattcgcggggcagaaattgatcgactcgtcgctgggtgt
acaggcgttaaacgaactaccgggcaacatccaggtggtattatcgttattccagattat
atggatgtttacgattttacaccggtgcagttcccagctgatgcgacggactcagaatgg
aaaacgacccattttgacttccattcgattcatgataacgtattaaaattagatatactt
ggacacgatgatccgactgctatccggatgttacaggatttaagcggtatcgatccaaaa
acgattccaaccgatgatccagatgtcatgaaactatttgggtctacagagtcacttggt
gttaagcctgcagatattgattcaaaaacaggaacattaggaatccctgaatttgggacg
cgttttgtaagacaaatgctagaacaaactaaaccaacaacattttctgagctagtacaa
atctctggtctttcccacgggacggacgtttggcttggaaatgcggaagaattaatcaaa
aacaaaacatgcgaactgccagatgtaattggttgtcgtgatgatattatggttttccta
atttatcaagggctagaaagttcattagcctttaagatcatggagtctgtgcgtaaaggg
aaaggcttaacggaagaaatggaagaagcaatgatggcgaataaagtgccactttggtac
attgaatcttgtaaaaaaatcaaatacatgttccccaaagcccatgctgccgcttacgtt
ttaatggcagtccggattgcttatttcaaagtacattatccactatatttttatgcaact
tatttcaccgttcgtgccgatgatttcgatttaacatcgatggtaaacggaaaagaagcc
gtgaaagcaaccatgaaagaagtaaatgataaagggatggaagcttcaacgaaagagaaa
aacttattaaccgttttagaaattgcgaatgaaatgctagctcgaggattccatttccaa
aaagttgatttgtataaatcgtctgctgatgagttcattattgacggagactcacttatt
ccgccattcaatgcgattccaagtcttggaaccaatgtagcaaaacaaatagttgccgct
cgtgaaaatggagagtttttgtcgaaagaagacttacaacagcgcggaaaagtatccaaa
acaatcattcagtacatggatgatcaaggatgcttggaaggattgcctgatcaaaatcag
ttgtcactattctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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