KEGG   Listeria monocytogenes 10403S (serotype 1/2a): LMRG_01799
Entry
LMRG_01799        CDS       T01984                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
lmt  Listeria monocytogenes 10403S (serotype 1/2a)
Pathway
lmt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMRG_01799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmt03019]
    LMRG_01799
   03016 Transfer RNA biogenesis [BR:lmt03016]
    LMRG_01799
Enzymes [BR:lmt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     LMRG_01799
Messenger RNA biogenesis [BR:lmt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LMRG_01799
Transfer RNA biogenesis [BR:lmt03016]
 Prokaryotic type
  tRNA degradation factors
   LMRG_01799
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 RNase_II_C_S1
Other DBs
NCBI-ProteinID: AEO07425
UniProt: A0A0H3GFH9
Position
complement(2474899..2477280)
AA seq 793 aa
MEQKQMEEKIMNLLTSAPDKTFALEDLEIEIALNNADDFKLMVKALVKLEDSGTIVRSRK
NRYALPEKMDLVKGTFRAHERGFGFVLPEEKEMDDIFIPPNEVKDAMNGDLVFATITKRK
GDNLAEGTIKKIVERKTTQIVGTYMEDLAGTPIVMPDDKRLFGEVEIDLEDGLKPVDGHK
VIVELTEYATGHARARGVVKSIIGHRNDPGVDILSIIHKHGISIGFPEEVMEQVSKAPDV
VDDSDIGNRRDLRDQMIITIDGADAKDLDDAVTVKQLPNGNWKLGVHIADVTHYVTEGSP
LDVEAQERGTSVYLVDRVIPMLPHKLSNGICSLNPQVDRFTMSCEMEIDQEGHVVNHEIF
ESIIKTTERMTYTDVNDILVEKDEALREKYAPIVPMLEAMENLAEILRRKREKRGAIDFD
FKEARVVVDEDGHPEAVVIRERSAGEHLIEEFMLAANETVAEHFHWMDVPFIYRIHEDPK
EDKLARFFEFITNFGLIVKGTANDIHPAALQQVLEEVKGKPEEMVVSTVMLRSMQQAKYD
TVSAGHFGLSTDFYTHFTSPIRRYPDLIVHRLIREYLINGDVRPETLEKRAEELPEIAEH
SSKMERRAVEAERETDELKKTEFMVDKVGERFIGIISSVTNFGLFIELPTTIEGLVHVSA
MKGDYFKFHQNQLAMIGERTGQIYRIGDEVEVEVTKVDVDAREIDFALRSEGKPGPVSDK
QKRQREKPIDKTRNFKSSSKNNRNKRRTGKSEDVKPKTERKDDEWYTKPKKKKKKKPFYQ
GVAKESPKKKKRR
NT seq 2382 nt   +upstreamnt  +downstreamnt
gtggaacaaaaacaaatggaagaaaaaattatgaatctattaacttcagcgcctgataaa
acatttgcgctagaagatttggaaatagaaatagctttaaataacgcggatgattttaaa
ttaatggtgaaagctttagtaaaactggaagattccggaactattgtccgctcaaggaag
aatcggtatgcattaccagaaaaaatggacttagtaaaaggaacatttcgcgcacatgaa
cgaggttttggctttgttctcccagaagagaaagaaatggacgatatttttatcccacca
aatgaagtaaaagacgcaatgaatggcgacttagtttttgctacaattacgaaacgtaaa
ggcgataatttggcagaaggtacgattaagaaaattgtcgaacggaagacaacgcaaatc
gtcggaacttatatggaggacttagctggtactccaattgtgatgccggacgacaaacga
ctttttggtgaagtggaaattgatttagaagacggcttaaaaccagttgacgggcataaa
gttatcgttgaattgacggaatatgcaactggccatgcgcgtgcaagaggggttgttaag
tcaatcattgggcaccgcaatgacccgggagtggatattttatcgattattcataaacat
ggtatttcgattggcttccctgaagaggtaatggaacaagtaagtaaagcgccggatgtg
gttgatgattcggatattggtaaccgtcgtgatcttcgtgaccaaatgattattacgatt
gacggagcagatgctaaggatttagatgatgctgttacggtgaagcaacttccgaacggt
aactggaagctgggcgttcatattgctgatgtaacgcattatgtgacagaaggctcgccg
cttgatgtcgaagcgcaagaacgtggaacgagtgtttatttggttgaccgggtaattccg
atgttgccacataaactatcgaacggaatttgctcgcttaacccgcaagtagaccgtttt
accatgagttgtgaaatggaaatcgatcaagaaggtcatgtggttaaccacgaaattttt
gaaagtattattaaaacaacggaacgtatgacgtatacggatgtaaatgatattttagtc
gaaaaggatgaagctttacgcgaaaaatatgcgccaatcgttccaatgcttgaagcaatg
gaaaatttagccgaaatccttcgtcgtaaacgtgaaaaacgtggcgcgattgattttgac
tttaaagaagcacgtgtagtagtggatgaagacggtcatccagaagcggtcgtgattcgc
gaacgttcagcgggagagcatttaattgaagaatttatgcttgctgccaatgaaacagtt
gcagaacattttcactggatggatgtgccatttatttatcgtatccatgaagatccaaaa
gaagataaattagcacggttctttgaattcattacgaacttcggcttgattgtgaaagga
acagccaacgatattcacccagctgctttacaacaagtactagaagaagtaaaaggtaaa
ccggaagagatggttgtttcgactgttatgctgcgttcgatgcaacaagcgaagtatgac
acagtaagcgccggacactttggtttgtctactgatttctatacacatttcacgtcgcca
attcgtcggtacccggatttaatcgttcacaggttgattagagagtatttaattaacgga
gatgttcgtccggaaacgttagaaaaacgagctgaggagcttcctgagattgctgaacac
agctcaaaaatggagcgtcgcgccgttgaagcagagcgcgaaacagacgaactgaagaaa
acggaatttatggtcgacaaagtgggcgaacgtttcatcggaatcattagttcggtaacc
aattttggcttatttatcgaactaccgacgacgattgaaggccttgtccatgtgagcgca
atgaaaggcgattacttcaaattccatcaaaatcagttagcgatgattggcgaaagaaca
ggccaaatttatcgtatcggtgatgaagtggaagtcgaagtaactaaagtagacgtggat
gctcgtgaaatcgattttgcgcttcgtagtgaaggtaaaccaggtccagtgagcgacaaa
caaaaacgccaacgcgaaaaaccgattgataaaacgagaaacttcaagagtagctcaaaa
aataatcggaataaacgcagaactggtaaatcagaagacgtgaaaccaaaaacagaacgc
aaagatgacgaatggtatacaaaacctaaaaagaaaaagaagaaaaaacctttttatcaa
ggtgtagcaaaagaaagcccgaagaagaaaaaacgtcgctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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