KEGG   Limosilactobacillus mucosae: LBLM1_06715
Entry
LBLM1_06715       CDS       T03814                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
lmu  Limosilactobacillus mucosae
Pathway
lmu03030  DNA replication
lmu03430  Mismatch repair
lmu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LBLM1_06715 (dnaE)
   03430 Mismatch repair
    LBLM1_06715 (dnaE)
   03440 Homologous recombination
    LBLM1_06715 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmu03032]
    LBLM1_06715 (dnaE)
   03400 DNA repair and recombination proteins [BR:lmu03400]
    LBLM1_06715 (dnaE)
Enzymes [BR:lmu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LBLM1_06715 (dnaE)
DNA replication proteins [BR:lmu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LBLM1_06715 (dnaE)
DNA repair and recombination proteins [BR:lmu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LBLM1_06715 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon HROB CCT
Other DBs
NCBI-ProteinID: AJT50727
UniProt: A0A0D4CKP4
Position
complement(1451160..1454486)
AA seq 1108 aa
MEIVPLNVISTYSLLQSPLRPTELVQGAKSRGYRAVALADWNVMYGAIDFYNAAKAAGIK
PLLGLRLHLKTMAMTTQGLEVLFLARTQAGYVNLMQLSTLKQTQAQGRFLTQQEIEPFLT
DLDLILPAQPLTLDQTMIDQWLPALIEKTAGHCWLGVDLELDAIQREQIRQTARQYAVSL
VAAPKIEYLENDDAFATDVLRHIDEGAKMTNPFFQAQNTISHALPTREQLQQAFLDSEFE
GAAAQTAIIAQECNVEIKFQMPILPKFPTPNQQSAADYLKQLCLAGLKKRPLAAGYSPID
YEKRLQRELTTIHEMGFDDYFLIVWDVMRFAHQKKLATDPGRGSAAGSLVAYVLEITEVD
PLKYQLLFERFLNPERAQMPDIDLDLPDNRRDEVLQYVHQKYGHARVAQIITFGTFGAKQ
AVRDVGRVFGMPVYAIDELARAIPNLPKITLQQALSESRALNNLLSDSAQNALLMKTALR
IEGLPRHYSTHAAGVVLSQAPLNQLVPLQNGSDGLLMTQFPKDTVEALGLLKMDFLGLRN
LSIMDSALQLIEKSQPDFDLHQINLNDPLTLKLFQKGATGGIFQFESSGIRQVLIRLHPE
NFEMIVAVNALYRPGPMDNIAHFIARKEGREKVTLPDPSLASILAPTYGILVYQEQVMQL
AAKMAGFTLGQADLLRRAMSKKKADVMERMRGRFIKGAVANGYSRPVAEQVFEYIDRFAN
YGFNRSHAVAYSMMAFEMAYLKCHFAPAFFAALLNAHAGSEKMRAYFEDAKSFGVVIAGP
SINFSQADFSLYQGRVLFGLSMIKGVRRDLISEILLKRKDGQFASLADFIGRIDVRFRKP
ELIAPLIYAGAFDRLGSNRAEMIDALADLIEGAEFNQALLGSDTFQTMIPARPEYPLAQR
LEKEHEYLGVYLSGHPVSQYRSLAGQLHAVTVAQLKEGMNATLILYVSRVKTINTKKTRQ
PMAFVSTSDETGSIEATVFPKQFQRYQELIAARNVLIISGRVENRNGSLQLLASRIQLAS
SAGERGSAPAKTRWFLQLRKNALTPRLTAQLQEFISSHHGNVPVMVYYPETRQTRLLPRS
QWLSGDEATKKGLIDLLGVSNVVYQSTS
NT seq 3327 nt   +upstreamnt  +downstreamnt
atggaaattgtgccgctcaacgtgatcagcacatacagtctcttgcagagtccgctgcgc
ccgactgaattggttcaaggagccaaaagcaggggctatcgggcggttgccttggctgac
tggaacgtgatgtatggggcaattgatttttataatgctgccaaagcggcgggcattaag
cctttgctggggttgcggctgcatttgaaaaccatggcaatgaccacgcagggcttggaa
gttttgtttttggcccgtacgcaggctggctacgttaacctgatgcagctgtcgacctta
aagcagacacaagcacagggacgttttttgacgcagcaggagatcgagccgtttttaacg
gacctggatctgattttgcctgctcagccgctgacgcttgatcaaacgatgattgaccaa
tggctgccggcgctgattgagaagacggcagggcattgctggctgggggttgatctggag
cttgatgccattcagcgcgaacagattagacaaacggcgcgacaatatgccgtttcactg
gtagcagcccctaaaatcgagtatctggaaaatgatgatgcctttgcgaccgatgtttta
agacatattgatgagggtgccaaaatgaccaatccgtttttccaggctcagaatacgatc
agtcacgccttgccaaccagagaacagctgcagcaggcctttttggattctgaatttgaa
ggtgcggctgctcagacagcgatcatcgcgcaggaatgcaatgttgagatcaagtttcaa
atgcctatcctgcctaagtttcctacgccaaaccagcaaagcgcggccgattatctaaag
cagctttgtttggcaggtctgaaaaagcgtccattggcagctggctattcgccaatcgat
tatgagaagcgcctgcagcgtgaactgaccacgattcatgaaatgggctttgatgattat
tttctgattgtctgggacgttatgcgctttgcccaccaaaaaaagctggcgactgatcca
gggcgtgggtcggcagctggctcgctagtggcctacgtgttggagattactgaagtcgat
cccctaaaataccagctgcttttcgaacggttcttaaatccagaacgagctcagatgccg
gatatcgacttggacctgccagataatcggcgtgatgaggttttgcaatacgttcatcaa
aaatatggtcatgccagagttgctcagatcattacctttgggacgttcggtgctaagcag
gccgtcagagacgtgggccgcgttttcggtatgccggtctatgccatcgacgaactagcc
cgagcgattcccaacctgcctaagattacgctgcagcaggcattgagcgaatcacgggct
cttaataatctgctcagtgattctgcgcagaacgcacttttgatgaagacggcactccgt
attgagggactgcccagacactactcgacgcatgcggctggagtcgtcttgtcgcaagca
ccattgaatcagctggttccgttgcaaaacggcagcgatggcctcttaatgacgcagttt
cctaaagacacggttgaggcactgggacttttgaagatggatttcttgggcctgcgcaat
ctgtcaatcatggattcagccctgcagctgattgaaaaaagccagcctgactttgacctg
catcagatcaatctcaacgatccgctgactttaaagctgtttcaaaaaggagcaacggga
gggatctttcagtttgagtcaagcgggattcgtcaggtcttgattcggctgcatccagaa
aactttgagatgatcgtagcagtcaatgccttatatcggcccggtccaatggataacatt
gcccattttattgcacggaaggaagggcgtgaaaaggtcactttgcctgatccttcattg
gcatcgattctggcaccgacttacggcattctggtgtatcaagaacaggtaatgcaactg
gccgctaaaatggcgggtttcactttaggacaggccgatctgctgcgccgtgccatgagt
aagaaaaaagccgatgtgatggaacggatgcggggacgctttattaaaggagcagttgcc
aatggttattccagaccggttgctgaacaggtttttgaatatattgatcggtttgccaat
tacggtttcaaccgttcacatgccgtggcctactcaatgatggcttttgaaatggcctat
cttaaatgtcactttgcgccggctttttttgccgcgcttttgaatgctcacgcgggatca
gaaaagatgcgggcctattttgaggatgccaaatcatttggcgttgtcattgccggcccc
agcatcaattttagtcaggctgattttagtctgtaccaaggacgcgtcttgtttggtctg
tccatgatcaagggcgtgcgtcgtgatctgatcagcgagattctcctaaaaagaaaggat
ggtcagtttgccagcctggctgattttatcggccgcattgacgtcagatttagaaagcct
gagctgattgcaccgctgatctatgccggtgcgtttgatcgtttgggcagcaatcgtgct
gaaatgattgatgctttggctgatttaattgaaggtgccgagttcaaccaggcgctttta
ggcagcgacacctttcaaacgatgattccggctcgtcctgagtatccgttggcccagcga
ctggaaaaagagcatgagtatctgggcgtgtatctgtcaggacacccggtcagtcaatat
cgatcattggctggtcagctgcacgcggttacggtcgcccagctaaaagaagggatgaac
gcgaccctgattctctacgtcagccgcgttaaaacgatcaataccaaaaaaacgcgtcag
ccgatggcattcgtcagtacctcagatgaaacgggcagcattgaggcaaccgtttttccc
aaacagtttcagcgttaccaagaactgatcgctgcacgtaatgttttgattatcagcggt
cgggtagaaaatcgtaacggcagtctgcagctgctggccagtcgcattcagctggcctct
tctgctggtgagcgtggatcggcgccagctaagacgcgctggtttttgcagctgagaaag
aatgcgctgacgccgcgcttgaccgcccagctgcaggaatttatcagcagtcaccatggc
aacgtgccggtgatggtctactatcccgaaacgcggcagacgcgtctgcttccgcgcagt
cagtggctcagtggggatgaggcgactaaaaaagggctgattgatcttttgggagtcagc
aacgtggtctatcaatccacgtcgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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