KEGG   Listeria monocytogenes SLCC2372 (serotype 1/2c): LMOSLCC2372_0158
Entry
LMOSLCC2372_0158  CDS       T02220                                 
Name
(GenBank) DNA repair helicase family protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
lmx  Listeria monocytogenes SLCC2372 (serotype 1/2c)
Pathway
lmx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LMOSLCC2372_0158
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMOSLCC2372_0158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmx03021]
    LMOSLCC2372_0158
   03400 DNA repair and recombination proteins [BR:lmx03400]
    LMOSLCC2372_0158
Enzymes [BR:lmx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LMOSLCC2372_0158
Transcription machinery [BR:lmx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LMOSLCC2372_0158
DNA repair and recombination proteins [BR:lmx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LMOSLCC2372_0158
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: CBY53493
Position
153577..155916
AA seq 779 aa
MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRI
VDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLA
EVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQEL
TFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFY
FTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLN
EALFDMLQSEEAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRF
FAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKD
MIALNKKLKDLDGTIYVQKNELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESL
RYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYY
TNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGENGN
YLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVL
GGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVL
QAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgagaaaagtgcgtatttcagttaggcgtttagtagagtttgtgcggagaagcggtagt
attgataaccggatgactagttcagaccgcgccttagaaggaacaaaaattcatcaatta
ctccaaaaagaagctggggaagaatatgctgcagaggtacggctaaacctagaccgaata
gtggacggaattgctttttcgcttgatggacgcgcagatggcatcataaatggccgaatg
attgatgaaattaaaacaactgagacgccaatggatgaaattaccgaaaattttcgacct
cttcactgggcgcaacttatttgttatggatttatgcttgcagaaaagtccgatttggca
gaagttactctacaattaacgtattatcaagtagttgacaaagaagtaaaacaatttcaa
cgtgtaatgagtcgcgaggaactgagcgtttttgtggacgatttactttcccaatacgct
atttgggcaaaggcatctgccgcttgggaaatgaaacgaaataaaacaattcaagaatta
acgtttccatatgacagctatcgaagtgggcaaagagagcttgccattgcagtgtaccga
acaatatcttcagaagaaagtttgttttgtgaagcacccacaggtatcggcaaaacaatg
tcgaccttgtttcccggtattaaagctatgggtgaagggaaaacggataaattgttttac
tttactgcaaaaactattacgcggcaagttgccgaagatgcgctagatgagatgcgtcgt
aaaggacttgctgcaaggagtgttacaataactgcgaaggataagatatgctttttagac
gagaggaaatgtgaaccagatcattgccaatttgcgcgaggttattatgatcgtttgaac
gaagcattgtttgatatgttgcaatccgaagaagcaattacccgtcaagttgttgagagt
tatgcccggaaatacacactttgtccatttgaattatcgctggatgtggctcttttttgt
gatgtaatagtttgtgattataattatttattcgacccggtagtctacttgaaacgtttc
tttgcagaagggccaggtaaatatacttttctggtggatgaagtgcataatttagtagac
cgtgcgcgctcgatgtactcagcgacattaaaaaaatctgcagttatgcaagtcaaacgg
ggactggacgcaaaaaataacaagcgattgctaaatgcaatcaatgtgatgaataaagac
atgatcgcactcaataaaaaactaaaggatttagatggaactatatatgtgcaaaaaaat
gaactcattgattggaatgaatcggtcctaaaattcacctttgtagcgaaggaatggttg
ccgcaaaatactcagtcagaaatacaagcggatgtgttggaactttattttgaaagtttg
agatatgttgcaattgcggatttttatgatgatcgttacgtcacacaagtaacgaaaagc
cacggagatttagaaataaaacaagtatgcttggatccgtcgttcttattatcagaaaga
ctgaaactcggaagcagctcggtgctcttttcagcaacgcttcgaccaatagattactat
acaaatttacttggtggtcaagaagacacgagtagaatgattttttcttcaccatttaaa
caaaaaaacatgcatttactagtagcggattatattagtacgaaataccaaatgcgcgaa
aatagtatggaagctgtcgtagatgctctctatgctctagtctctggggaaaacggcaac
tatttatttttctttccatcatttctatatttacaaaaggtatacgatttatttaaagaa
aaatatcctaacatcaggttgcaaaaacaagaaactgctatggatgaagagcgacgggag
cattttttagaaagatttcaagcagagaatgtagaaactttgattggcttttgcgtctta
ggaggcgttttttcagaaggggtagatcttcgtggcaaccgattagtcggtgcggcagtt
gttggagtaggacttgcgcaactgaatcacgaatctgatttaattaaagattattataat
gaaacgattggtcggggatttgattatgcatatcagataccaggaatgaataaggtgctt
caagcagttggccgggttattcgaggagaatcggaccgtggcgtagtgttgttaatagaa
gaacgattttctgccgatcgttaccgagcattattccctacgcactggaaccatgcgaaa
acagtgaagagcacagacgatatctcccgagaagtggccggattttggcggaatagctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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