KEGG   Listeria monocytogenes SLCC2372 (serotype 1/2c): LMOSLCC2372_0259
Entry
LMOSLCC2372_0259  CDS       T02220                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
lmx  Listeria monocytogenes SLCC2372 (serotype 1/2c)
Pathway
lmx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LMOSLCC2372_0259 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmx03021]
    LMOSLCC2372_0259 (rpoB)
   03400 DNA repair and recombination proteins [BR:lmx03400]
    LMOSLCC2372_0259 (rpoB)
Enzymes [BR:lmx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LMOSLCC2372_0259 (rpoB)
Transcription machinery [BR:lmx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LMOSLCC2372_0259 (rpoB)
DNA repair and recombination proteins [BR:lmx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LMOSLCC2372_0259 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: CBY53594
Position
272956..276510
AA seq 1184 aa
MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFLDEGLREMFRDISPIED
FAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLINKETGEVKDQEVFMGDFP
LMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKGFGSTVIPNRGAWLEYETDAK
DVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNDYLRNTLEKDNTDNAEKALLEIY
ERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRYKINKKLHLKNRLFNQTLAETLVDP
ETGEIIASKGDILDRRNLDQIIPNLENGVGFRTLRPTDGVMEDSVLVQSIKIYAPNDEEK
EINIIGNAYIEENVKHITPSDIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVRERMSIQDMTTITPQQLINIRPVVASIKEFFGSSQLSQFMDQTNPLGE
LTHKRRLSALGPGGLTRERAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNK
FGFIETPYRRVDPETNRVTDKIDYLTADEEDNYVVAQANSKLDEQGTFTEEEVMARFRSE
NLAVEKERIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVG
TGMEHVSAKDSGAAVTAKHDGIVEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSN
QGTCYNQRPNVAEGDRVVKGEILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSE
RLVKDDVYTSIHIEEFESEARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDN
DLLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGD
ELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNP
LGVPSRMNIGQVLELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYD
GRSGEAFDNRISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLG
MDVKMLSADEEEIEMRDMDDDDFTNQNDAFNIVQPENAAAEKTE
NT seq 3555 nt   +upstreamnt  +downstreamnt
ttgtcaggacattcaggacatgatgtaaaatatggacggcatcgtacgcgtagaagtttt
gcgcgaatcagtgaagtacttgaattaccaaacttaattgagattcaaacagcttcttac
caatggttcttagatgaagggctacgtgagatgttccgcgatatttcgccaattgaggat
tttgcgggtaatttatctttagaattcattgattacgatcttggagagccgaaatattcg
gtagaagaatctaagaaccgtgatgcaaactatgcggctccactgcgcgtgaagttgcgc
ctaatcaacaaagaaaccggcgaagtaaaagaccaagaagtatttatgggtgatttccca
ctaatgactgaaatgggtacgttcattattaatggggcagaacgtgttatcgtttcccag
ttagttcgttctccaggtgtttacttcaatggaaaactagacaaaaatggtaaaaaaggc
tttggttctactgtcatccctaaccgtggggcttggcttgagtatgaaacagatgctaaa
gacgttgtacacgttcgtattgaccgtacacgtaaattaccagtaactgttttacttcgt
gcactaggctttggttccgatcaagaaattattgatttaatcggggacaatgactacttg
cgcaacacgcttgaaaaagacaacactgacaatgctgaaaaagcacttctagaaatttac
gaaagattacgtccgggtgaacccccaacagttgataacgctagaagcttactagtttct
cgtttctttgatccaaaacgctacgatcttgcaagcgttggacgttataaaatcaacaaa
aaattacatctgaaaaaccgtctattcaaccaaacattagcagaaactttagtggatcca
gaaactggtgaaattatcgcttctaaaggtgacatattggatcgtcgtaatttagatcaa
attattcctaatttagaaaacggtgtaggtttccgcacacttcgtccaactgatggagtg
atggaagatagcgtactcgttcaatctattaaaatttacgcaccaaatgatgaagaaaaa
gaaatcaacatcatcggtaacgcgtatatcgaagaaaacgtaaaacacatcacgccttct
gatattatttcatccattagctacttctttaacttgctacatggtgttggcgatacagat
gacatcgatcacctaggtaatcgtcgtcttcgttctgttggtgaacttttacaaaaccaa
ttccgtatcggtttatctcgtatggaacgtgtggttcgtgaacgtatgtctattcaagat
atgactacaattacaccacaacaattgattaatattcgtccagtagttgcatctatcaaa
gaattttttggtagctcgcagttatctcagttcatggatcaaacaaatccacttggcgaa
cttacgcataaacgtcgtctttcagcgcttggacctggtggtttgacgcgtgaacgtgct
ggttatgaagtacgtgacgtgcattactctcactatggccgtatgtgtccgattgaaacg
ccagagggaccaaacattggtttgattaactccctttcttctttcgcaaaagtaaataaa
ttcggctttatcgaaacgccttaccgccgcgtagatcctgaaacaaaccgtgttacagat
aagattgattatctaactgcggatgaagaggataattacgtagtagcgcaagcgaactcg
aaattagacgaacaaggtactttcacagaagaagaagttatggctcgtttccgttcagaa
aacttagcggtagaaaaagaacgtattgactacatggacgtatcgcctaaacaggttgta
tctgttgcgacagcatgtattccgttccttgaaaacgatgatagtaaccgtgcgctaatg
ggagcgaacatgcaacgtcaagcagtacctcttatgcaccctgaagctccatttgttgga
acaggtatggaacacgtatctgcgaaagactctggtgctgctgtaactgccaaacatgac
ggtattgtagaacacgttgaagctcgcgaaatctgggttcgtcgtgtatctctagtggat
ggcaaagaagtaactggcggaatcgataaatatactttacgtaaatttgttcgttctaac
caagggacttgttataaccaacgtccaaacgtagcagaaggagaccgcgttgttaaagga
gaaatccttggtaacggtccatctatggattccggtgaacttgcacttggtcgtaacgta
ctagttgcgttcatgacttgggatggttataactacgaggatgcgatcatcatgagtgaa
cgtcttgtaaaagatgacgtttatacttcgattcatattgaagaatttgaatcagaagct
cgtgatacaaaactcggacctgaagaaatgactcgtgatattccaaatgttggggaagac
gctttacgtgaccttgacgaacgtggaattatccgtgttggtgcggaagtaaaagacaac
gaccttctagttggtaaagtaacaccaaaaggagttactgaattaactgcagaagaacgt
ttattacacgctatctttggtgaaaaagcacgtgaagttcgtgatacttcattacgtgta
cctcacggcggcggcggaatcgtgcttgacgtgaagatctttacacgtgaagcaggcgac
gaactaccacctggagtaaaccaattagtacgtgtttatattgtacaaaaacgtaaaatc
catgaaggcgataaaatggccggacgtcacggtaacaaaggggttatctcccgtatttta
cctgaagaagatatgccatttatgccagacggaacacctgttgatatcatgcttaaccca
ctaggggtaccatctcgtatgaatatcggacaagtacttgagctacacttaggtatggct
gctcgtgctttaggaattcacgttgcaacaccagtatttgatggtgcgaatgaagaagat
gtttggagcacagtggaagaagccggtatggcccgcgatgcgaaaacaattctttatgac
ggacgttctggtgaagcattcgataaccgtatctctgttggtgtaatgtacatgatcaaa
cttgcccacatggttgatgataaacttcatgcacgttcaactggaccttactctctagta
acgcaacaacctcttggtggtaaagcacaatttggtggacaacgttttggggaaatggaa
gtatgggcacttgaagcatatggtgccgcttatactcttcaagaaatcctaacgattaaa
tccgatgacgtggttggtcgtgtgaaaacttacgaagcgattgttaaaggcgaaagcgtt
ccagaacctggtgtgccagaatccttcaaagtactcatcaaagagcttcaaagtcttgga
atggacgttaaaatgctttccgcagacgaagaagaaatcgagatgcgtgacatggatgat
gatgactttactaatcaaaatgatgccttcaatatcgtacaaccggaaaatgcagccgct
gaaaagactgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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