KEGG T06193: FZC33

Labrys sp. KNU-23: FZC33_31230

Entry

FZC33_31230       CDS       T06193

Symbol

rnc

Name

(GenBank) ribonuclease III

K03685

ribonuclease III [EC:3.1.26.3]

Organism

lne Labrys sp. KNU-23

Brite

KEGG Orthology (KO) [BR:lne00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lne03019]
    FZC33_31230 (rnc)
   03009 Ribosome biogenesis [BR:lne03009]
    FZC33_31230 (rnc)
   03036 Chromosome and associated proteins [BR:lne03036]
    FZC33_31230 (rnc)
Enzymes [BR:lne01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     FZC33_31230 (rnc)
Messenger RNA biogenesis [BR:lne03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FZC33_31230 (rnc)
Ribosome biogenesis [BR:lne03009]
Eukaryotic type
  90S particles
   RNase
    FZC33_31230 (rnc)
Prokaryotic type
  rRNA processing factors
   FZC33_31230 (rnc)
Chromosome and associated proteins [BR:lne03036]
Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     FZC33_31230 (rnc)

SSDB

Motif

Pfam:

Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM DUF3323

Other DBs

NCBI-ProteinID:

QEN90509

UniProt:

A0A5C1WN08

Position

1:4735393..4736106

AA seq 237 aa
MSSKKKPPLETLEAALGHVFADRSLLERALTHISFLDGPARLASYQRLEFLGDRVLGLAV
ADMLYRVFPDDEEGAMSRRLSDLVRKETCAAVAIDWGVGPHVKLGLGEAHSGGRKRVTTL
GDVCEALIGGVFVDAGYEKARAVVEKAWRERLHAPVRPPSDAKTALQEWAQGRALKAPTY
RLVSRTGPDHNPRFVIAVDIETLISAEGEGKSKRLAEQAAASAFMAREGISLEGWRS

NT seq 714 nt +upstreamnt +downstreamnt
atgagctcgaagaagaaacctccgctggaaaccctggaagccgcgctcgggcatgtcttt
gccgatcgctccctcctggaacgagcgttgacgcatatcagctttctcgacgggccagcg
cggctggcgagttatcagcgcctggagtttctcggcgaccgggtgctcggactggcggtt
gccgacatgctttaccgcgtcttccccgatgacgaggagggcgcgatgtcgcgccggctt
tccgaccttgtgcgcaaggagacctgcgccgcggtcgcaatcgactggggtgtcggtccg
catgtgaagctcggcctcggcgaggcgcattcgggcgggcgcaagcgtgtcaccacgctc
ggcgacgtttgcgaggccttgatcggcggcgttttcgtggatgccggctatgagaaggcg
cgcgccgtggtcgagaaggcctggcgcgagcggcttcatgccccggttcggccgccgagc
gacgccaagacagccttgcaggaatgggcccagggccgcgcgctgaaggccccgacctat
cgcctggtttcgcgtacgggacccgaccacaatccgcgcttcgtgattgccgtcgatatc
gagacgctgatctcggccgagggggaaggcaagtcgaaacgcctggccgagcaggcggcc
gcctccgccttcatggcgcgcgaaggcatctctctggagggatggcggagctga

All links

Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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