KEGG   Enterobacter sp. SGAir0187: CWR52_03710
Entry
CWR52_03710       CDS       T05333                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
lni  Enterobacter sp. SGAir0187
Pathway
lni03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lni00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CWR52_03710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lni03019]
    CWR52_03710
   03009 Ribosome biogenesis [BR:lni03009]
    CWR52_03710
Enzymes [BR:lni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     CWR52_03710
Messenger RNA biogenesis [BR:lni03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CWR52_03710
Ribosome biogenesis [BR:lni03009]
 Prokaryotic type
  rRNA processing factors
   CWR52_03710
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio PNPase_C S1
Other DBs
NCBI-ProteinID: AVH16350
Position
766954..770073
AA seq 1039 aa
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFTSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIEARQGGVRCIIVPNDQME
TPHYHVLRVRKGEETSTLSYLLPKLHEEEMALPSDDEPAERKLPEQPALATFIMPEAPPE
AALEKPAAKPAAQKPEATAAKAQPAQPGLLSRFFGALKKMFAGEEVQPEQPKEEPKAAKP
ERQQDRRKRQNNRRDRNDRSDRNERNERRDNRDNRSDNNEGREQREDNRRNRREKQQQNV
EDREIRQQAGDESEKSKQRDDQQPRRERNRRRNDEKRQAQQEVKNLNREEPVEQQDGEQE
ERTQVMPRRKQRQLAQKVRFASEATEESAIVAVETRESATGTQLAKVDLPAVVDNNVEQD
ENGENRDNAGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTIACASPEMASGKVW
IRYPVARPEQVVEEQPVAEEIIAPAAAVEEVVTEAATVVEPQVVEAEAPQAAEVETTHPE
VIAAPVDAAPQLIAEEDVVVAEEIAEEAEPVAAVEDTAEAIVETTTEEIVQDVEIEVEPV
VEEPKAHEVKPEPVVSAPAAAHVATAPMTRAPAPDYVPEAPRHSDWVRPAFSFEGKGAAG
GHSATHQATAPATRPQSVE
NT seq 3120 nt   +upstreamnt  +downstreamnt
atgaaaagaatgttaatcaacgcaactcagcaagaagagttgcgtgtcgcccttgtggat
gggcagcgcctgtacgatctggatatcgaaagtcctggacacgaacagaaaaaagcgaac
atttacaaaggcaaaatcacccgcattgaaccaagccttgaagctgcatttgtcgattac
ggtgctgagcgtcatggtttcctccctctgaaagaaatcgcccgcgaatatttccctgca
aactacaacgcccatggccgcccaaacatcaaagatgttctgcgtgaaggtcaggaagtt
atcgttcagattgataaagaagagcgtggcaacaaaggtgccgcactgacaacctttatc
agcctggcggggagctatctggtgctgatgccaaacaacccgcgtgcgggtggtatctct
cgccgtatcgaaggtgatgaccgtaccgagctgaaagaagcgctggcaagccttgaactg
cctgacggcatggggcttatcgtgcgtaccgcaggcgtcggcaaatccgccgaagcgctg
cagtgggacctgagcttccgcctgaagcactgggaagccatccagaaagcagcggaaagc
cgccctgctccgttcctgatccaccaggaaagcaacgtgatcgtgcgtgccttccgtgac
tacctgcgtcaggacatcggtgagattctgatcgataacccgaaagtgcttgagttggcg
cgccagcacatcgccgcgctgggccgtcctgatttcaccagcaaaattaaactgtacacc
ggtgaaatcccgctgttcagccactatcagatcgaatcccagattgaatccgccttccag
cgtgaagtgcgtctgccatccggcggttctatcgttatcgataccactgaagcgctgacc
gctatcgacatcaactccgctcgcgcaacgcgcggtggcgatatcgaagagaccgccttc
aacaccaaccttgaagccgctgatgaaatcgcccgccagctccgcctgcgtgacctgggt
ggtctgattgttatcgacttcatcgacatgacccctgtacgtcaccagcgtgcggtagaa
aaccgtctgcgcgaagcggtgcgtcaggacagggcgcgtattcagattagccatatctca
cgctttggcctgctggagatgtcccgtcagcgtctgagcccatcgctgggtgagtccagc
catcacgtctgcccacgctgctccggcaccggtaccgtgcgtgataacgaatcgctgtcc
ctctcgattctgcgtctgattgaagaagaagcgctgaaagagaataccaaagaggttcac
gcgattgtgcctgtgccaattgcgtcctacctgttgaacgaaaaacgtgctgcggtcagt
gccattgaagcgcgtcagggcggtgttcgctgcatcatcgtgccaaacgatcagatggaa
accccgcactaccacgtgctacgtgtccgtaaaggcgaagagacgtcaacgctcagctac
ctgctgccgaagctgcacgaagaagagatggccctgccatctgatgacgagccagcagag
cgtaagctgccagagcagcctgcgttagcgaccttcatcatgccagaagccccaccggaa
gccgccctggaaaaaccagcggccaaacctgcggcgcagaaaccagaagcgacggcagcg
aaagcccagccagcgcagccgggtctgctgagccgcttcttcggcgcgctgaagaagatg
tttgccggtgaggaagttcagccagagcagccgaaagaagagccaaaagcagccaagcct
gaacgtcagcaggaccgccgtaagcgtcagaacaaccgccgcgaccgtaatgaccgtagc
gatcgtaatgagcgcaacgagcgtcgtgacaaccgtgacaaccgctctgacaataacgaa
ggccgtgagcaacgcgaagacaaccgccgcaaccgtcgcgagaaacagcagcagaatgtt
gaagatcgtgaaattcgccagcaggcgggcgatgagtctgagaagagcaaacagcgtgac
gaccagcagccgcgccgtgaacgcaaccgtcgccgtaacgacgagaagcgtcaggcacag
caggaagtcaaaaacctgaaccgcgaagagcctgttgaacagcaggacggcgagcaggaa
gaacgtactcaggtcatgccgcgtcgtaagcagcgccagcttgctcagaaagttcgcttc
gcctccgaagcaaccgaagagtcagcaatcgtcgcggttgaaacccgcgagagcgcaacc
ggcacacagctggcaaaagttgacctgccagcggtcgttgataacaacgttgagcaggat
gaaaacggtgaaaaccgtgataacgccggcatgccgcgccgttcacgtcgttccccacgt
catctgcgcgtcagcggtcagcgccgtcgccgctatcgtgacgagcgttacccgactcag
tcgccaatgccgctgaccattgcctgtgcttcgccagaaatggcttccggcaaagtctgg
atccgctacccggtagcgcgtccggagcaggttgttgaagaacagccagttgcggaagag
atcattgcacctgcggcagcggtagaagaggtcgtgactgaagcggcaaccgtggttgaa
cctcaggttgttgaagcggaagcacctcaggcagctgaggtcgaaaccacgcatccggaa
gtgattgccgcgccggttgatgccgcaccgcagcttattgctgaagaagatgtggtggtg
gctgaggaaatcgctgaagaagctgaacctgtagccgccgtggaagacaccgctgaagcc
atcgtcgaaacgaccactgaagaaatcgttcaggacgttgagattgaggttgaaccggtt
gttgaagaaccgaaagcgcatgaagtgaaacctgagccggttgtttctgcgccagccgct
gcccacgtggcgacagcaccgatgacccgcgctccggcaccggattacgtgccagaagcc
ccgcgtcacagcgactgggttcgcccggccttcagtttcgaaggtaaaggcgcagccggt
ggtcacagtgcaacgcatcaggcgactgcaccggcaacgcgtccacagtctgtcgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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