KEGG   Loa loa (eye worm): LOAG_02196
Entry
LOAG_02196        CDS       T02664                                 
Name
(RefSeq) hypothetical protein
  KO
K14327  regulator of nonsense transcripts 2
Organism
loa  Loa loa (eye worm)
Pathway
loa03013  Nucleocytoplasmic transport
loa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOAG_02196
   03015 mRNA surveillance pathway
    LOAG_02196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loa03019]
    LOAG_02196
Messenger RNA biogenesis [BR:loa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     LOAG_02196
   mRNA cycle factors
    P-body specific factors
     LOAG_02196
SSDB
Motif
Pfam: MIF4G Upf2 MIF4G_like_2
Other DBs
NCBI-GeneID: 9939596
NCBI-ProteinID: XP_020303652
AA seq 1069 aa
MDVAMDERLRTYVQEVESRVRCQLDDRKKLEDAVPLSEEQLRKMDSTLKRTTAFMKKLKN
IGCIQLTSVLQDVDKVNLSKFVEEMTATIAEAKIKYSEVQAVVKVCVHLSCYYAEFSSLL
LLEFRKLLPSRRNDKIQNPSKLRVDIRLLGELCLHGVFGKEGVQLLGSVVSFLTLTDRTE
HINIPIVLPFCKAMNVDLLGLHPYSIKQVASAANIKLPETSVISVDHKKTFAQLLLDYRS
SLVDHIKQDLLEMNQLLLSIKRQTRTRGDASAEDRNHLGELRARYEKILTSGTQLSEYLG
VEMEAMKEEQSEDEEEEVSALALSRALQEGTITIWPDEDTRQFYETRMELRQLVPAILFQ
ESEQRTLDLVEGKIEDVDLSGLDAIAEEAEDEGDEHSEGIDDEETKIDLNEMDLPSVAMS
RIDAPKISGQDLKLRMIAFMEQLPWLINRDLIDKAALDFVTNLNTRNNRKKLCQMMLEQH
RNRLDLLPFYGRLVATLEPVMPDLALELSHSLLQQFRAAVQSKKKQRVDWKIRCARFISE
LVKFEIIPKGEGLSCLRMVLFDFRGHNIDMCCAMVDAMGQFLYRSTDSHGKMKILLGVMM
KKRDRVSDPRQQMLIDNAFYTCIPPPVQEKPKPASDPFQDFIRYLISNLSRYRMEITVRC
LRKLDWSDPVCANYAVECLSNPSLPRYNNVPYLASLVASLSSCHDWIGIRVLDATLEDIR
IALEFNSPSLNQSTVLSVIFLGQLYNYSVCDSPVIFKTLYQLITFGAFDPLLDDWSNLAR
IGLVCELLLVCGEYFNAGSAKKKLDCFLAYFYRYLLAKEEAFKARDIVFPKHVRFRVEEM
SDYVRKGVKIPESFDEAQEVVDGIQQQYGKMVDAAREGKIAQQIEEEIMDEEEEEPRKIN
CAAEAGGDENISSSDEIVVSIYDENESVRVHTNRVLLPEDELFVRQLEQIIAETMQSRAN
VVSVPVSEIVVPTSARQKFHRSIAFDANARSTKSDDTSNSGTETRMAILTRGKGNKTVLK
AIAMDAPSFLTETWNAQREKERMELTVHKHITLSINERMMMDDDESLSE
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggatgttgcaatggatgaacgtttacgaacttatgtacaagaagtggagagtcgagtg
agatgtcaacttgatgataggaaaaagttagaagatgctgttccattgtccgaagaacaa
cttcgaaaaatggatagtacgctgaagcggacgacagcttttatgaagaaattaaaaaat
attggatgcatacaactgacatcggttttgcaagatgtcgataaagttaatttatcaaag
ttcgtggaggaaatgactgcgacaattgccgaagcaaaaataaaatatagcgaggtacaa
gctgttgtaaaagtttgtgtgcatttatcttgttattatgcagaattctcatcccttctg
cttctggagttccgcaaactgctgccatcaaggcgaaatgacaagattcaaaatccttcc
aaattgcgcgtcgatatcagattgctgggcgaactctgtcttcatggtgttttcggaaag
gaaggcgttcagcttctgggttctgtagtttcatttcttacactcactgacagaaccgag
catatcaacattccaattgtattgccattttgcaaagctatgaatgttgatttacttggt
ttgcatccttactcaataaaacaggttgcatcagctgcaaatattaagttgcccgaaacg
tcagtaatatctgttgatcataaaaaaacattcgctcagcttcttctggattatcgctca
tcactggtggaccacataaaacaggacctacttgaaatgaaccagttattgctttcaata
aaacgtcagacgcgaacgaggggagatgcttctgctgaagaccgaaatcatctgggagaa
ttacgtgcacgctatgaaaaaattttaacgagtggaactcagctcagtgaatatttgggc
gttgaaatggaagcaatgaaggaagaacagagcgaagatgaagaagaagaggtttccgca
ctagcacttagccgtgcattacaagaaggaaccattactatatggccggatgaagacact
cgacagttttatgaaacaaggatggagcttcgacaacttgttccggcaattcttttccag
gaatcggaacaacgaacattagatctagttgaaggaaagattgaagatgttgatctaagc
ggtttggatgcaattgctgaagaagctgaagatgagggtgatgaacacagtgagggtatt
gatgatgaagagacaaaaatagatttgaatgaaatggatcttccatcagttgcaatgagt
cgtattgatgcaccaaaaatatctggacaagatttgaagctcaggatgattgcatttatg
gaacagcttccatggctaatcaacagggatttgatcgacaaggctgcacttgactttgtt
acaaatcttaataccaggaacaacagaaaaaaactctgtcaaatgatgctggaacagcat
cgaaatcggttagatttgcttccattctatggccgtttggtggcaactttggaaccagtt
atgcctgatttggctcttgaactttcgcattcattgcttcagcagtttcgcgcagctgtt
cagagtaagaaaaaacagcgtgtggactggaaaataaggtgtgctcggttcatctctgaa
ctggtgaagtttgaaatcataccgaaaggcgaaggtctttcttgtttgcgaatggtactt
tttgattttcgtggtcataacatcgacatgtgctgtgcaatggttgatgcaatgggacag
tttttatatcgttcaacggacagtcatggaaaaatgaaaatcttgcttggagttatgatg
aaaaaacgtgatcgtgttagtgatccgcgccaacagatgctgatagataatgcgttctac
acttgtatcccaccaccagtgcaagaaaaaccgaagcctgcaagcgacccatttcaagac
tttattcgttatttgataagtaatttatcacgttatcgaatggaaataactgtacgatgc
ctcaggaaattggactggtctgatcctgtttgtgctaattatgcagttgagtgcctcagt
aatccatctctaccgcggtacaataatgtgccgtatcttgcgtcacttgtagcatcgctt
tcatcatgtcatgattggattggtattcgagtacttgacgcaacgcttgaggatattcgc
atcgctttagaatttaacagtccatctcttaatcaaagcacagtgctgtcagtaatattt
ttgggtcaactgtataattatagcgtatgcgactctcccgttatatttaagactttgtat
caattgatcacttttggtgcttttgatccattactggatgactggagcaatctggcacga
attggtcttgtgtgcgaattacttctagtttgtggcgaatattttaatgctggttcagct
aagaaaaaattggattgtttcttagcatatttttaccgttatttattggctaaagaagaa
gcatttaaagctcgcgatattgttttccccaagcatgtgcgttttcgagtggaggagatg
agtgattatgtgcgaaaaggcgtcaaaatcccagaatctttcgacgaagcgcaagaagtt
gttgatggaatccagcaacaatacggaaaaatggtagatgcagcgcgtgaagggaaaata
gctcagcaaatagaagaagagataatggatgaagaggaagaagaaccacgcaagataaat
tgtgccgctgaagctggcggagacgaaaatatcagcagcagtgacgagattgttgtatca
atttatgatgaaaatgaaagcgttcgcgtgcatacaaatcgtgttctcctacctgaagac
gaactgttcgtgcgtcaacttgagcaaatcattgcagaaacgatgcagagcagggcaaat
gtcgtaagtgtaccagtttcggaaatagtggtgccgacatctgcacgtcaaaaatttcat
agaagcattgcatttgatgcaaacgctcgtagtacgaaatcggatgacacatcaaactca
ggaacggaaacaagaatggcgattttaacacgtgggaaagggaataaaacggtgttgaag
gcgatagcaatggatgcaccgagttttttgacggaaacgtggaatgcacagcgggagaaa
gaacgtatggaattgactgttcataagcacataacactgagtataaatgagcgcatgatg
atggatgatgatgaatctttatcagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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