KEGG   Loa loa (eye worm): LOAG_02335
Entry
LOAG_02335        CDS       T02664                                 
Name
(RefSeq) RNase3 domain-containing protein
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
loa  Loa loa (eye worm)
Pathway
loa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LOAG_02335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loa03019]
    LOAG_02335
   03009 Ribosome biogenesis [BR:loa03009]
    LOAG_02335
   03036 Chromosome and associated proteins [BR:loa03036]
    LOAG_02335
Enzymes [BR:loa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LOAG_02335
Messenger RNA biogenesis [BR:loa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LOAG_02335
Ribosome biogenesis [BR:loa03009]
 Eukaryotic type
  90S particles
   RNase
    LOAG_02335
 Prokaryotic type
  rRNA processing factors
   LOAG_02335
Chromosome and associated proteins [BR:loa03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LOAG_02335
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm YpoC
Other DBs
NCBI-GeneID: 9939720
NCBI-ProteinID: XP_003137921
UniProt: A0A1S0U6Y5
AA seq 1297 aa
MFSNAGPSLPRINLPQQALRPVLDPEVTGYGCSNSSGTVNLLPMGGGQSTVPPLIVSRTT
SANLFALRPLLHLSNSAEQMSDVHYRARRNAIGCPRPLFSEMERYQWSSASAVEKPQFVR
PPGSKNSRSLPSLRDVSRATTKQNLHTREVGISDVAICTSLSNYGISTAEPVDISDEDFN
YVGNEEEHGKHKSDNWHTTKRRHRKRRHEESSSGESESEQGKDVPRWQKLTKEDFIDTIL
SDTDDEIDQVEQTVAMSGFHSQSIPEEKFYRINDVGDSCATEELTKLHKRFRREITEKIA
KEKENQPKSDPPDILTFHDNCKCGHHSDTETESESCDSDDCIDDSDERSGNVSVDEQQTD
NKDKMTRLKMSESKKHSTVAKREVIRKRNHPAILHSDVCFNEVGQMNDGPECRCSWAAKK
SGLRHNKYAGETIIEKCDLNSSNSHRLWHYILYTEPNPNTVVRRSTKINYRDRIYELEGF
SVFFHKSLPSNFPQTPLSKWTSEYNIKFMQENIPTNFTIEDLELFHHYLFIDIMEMYDLK
TYPLDNTDGCPYYHCMPRFVYNFPDGGKEILPMSVVMIYLIENYHRLMTESEAQVLKQDA
DAFREFAENMRGSLVMNANKRPSTIRVDLIDRSDFLPNSPDTLFPLITHFGVRPSSHTYN
SNAEYQKMSKEYLRMRKILAMKPRVSAEERGKLAQKASQLKALRNDSQLKRDFVMSVSSR
DFYSTGLFPDIVQHGLLLILACAHVRFQWSLQVYEQERIHYVFKNRSLLELALTHPSYRT
NYGTNSDHARNTLNNCGVRSSKQRVHDRLVQQQLSAKKRGFHTLLEIMSKLGSKKAEQSP
LNHNERLEFLGDAVIEFITTIHLFYMFSELDEGGLATYRSTMVQNKNLAVLAKKIGLDEF
MLYAHGPDLCHESDLRHAMANAFEAMMAAIYLDAGIDECDRIFGHAMFADSKELLSTWFD
LEDHPLKRDNPNGDRHLINDVPALQLLTELEKSIGVTFKHIRVLAKAFTRRNIGFNNLTL
GHNQRLEFLGDTVLQLITTDYLYKHFPYHHEGHLSILRTCLVSNRTQSVICDDIGMTKYL
VTPKVMQKSGLPILRVKDKADLVEAFLGALYVDRGFDYCKVFCRICFFPRLKFFIIAQHW
NDPKSQLQQCCLTLRQMDGGEPDIPEYRTIAVEGPTNTRIYKVAVYFRKKRLAVGCGHTM
QLAQMRAAENALIKRSDLFPTLKNTTKYGAMQNRRDNGPFAKVKCVSTDRTKQRTTFNST
HVLQPDTGSLLIDDTQTSRPQIISLLDLKFDADGCLI
NT seq 3894 nt   +upstreamnt  +downstreamnt
atgttctctaatgctggtccaagtttgccccggatcaatttacctcagcaagcacttcgg
cctgttctcgatccggaagtgacgggatatggctgcagcaattcatcgggcacagttaat
ttgctacctatgggaggtggacaatcaacagttccgccactaattgtttcacgcaccaca
tcagcaaatctgtttgcgttgagaccactgcttcacttatctaactcagcggaacagatg
tcggatgttcactatcgagcacgtcgaaatgctattggttgtccaagacctttgttttct
gagatggaaaggtaccagtggtcatcagcatcggcagtcgaaaagccacaatttgtgaga
ccaccaggaagtaagaacagtcggtcactacccagtctgagagatgtctctcgtgccact
acaaagcagaatttgcatacaagagaagttgggatatccgatgttgctatttgtacgtca
ttatcgaattatgggatatccaccgcggaaccagtagatatcagcgatgaagatttcaat
tatgttggtaatgaagaagagcacggaaaacacaagagtgataactggcatacaacaaaa
agacgacataggaaacgaaggcatgaagagtctagcagtggcgaaagtgaatcagaacag
ggtaaagacgttcctcgctggcaaaagttgacaaaagaagactttattgacacaatatta
agcgatactgatgatgaaattgaccaggttgaacagactgtcgcaatgagtggtttccat
tcgcagagcattcctgaagaaaaattttatcgcattaacgatgttggtgatagctgtgct
accgaagagttgacaaagttgcataagagattcagaagagaaattacagaaaagatcgcg
aaggaaaaggaaaatcagccaaaatccgatcctccggatattctcacatttcatgataac
tgcaaatgtggccatcattcggatactgaaactgaatcagaaagttgtgattctgatgat
tgcatcgatgatagtgatgagagaagtggcaacgtatctgttgacgaacaacagactgac
aataaagacaaaatgactcgtcttaaaatgagtgaatccaaaaagcacagtactgttgcc
aaacgcgaggtcattaggaaacgtaatcatccagctattttacacagtgatgtttgcttc
aacgaagttggtcaaatgaacgatgggccagaatgtcgctgttcgtgggcagctaaaaaa
tcaggcttgcgtcataataaatatgctggagagactattatcgaaaagtgtgacctaaac
tcaagcaattcgcatcgtttatggcattatatactttatactgaacctaatccaaatact
gttgttcgccgttcaaccaaaatcaactatcgtgatagaatttatgagctggaaggcttt
tctgtgttttttcataagtcacttccatcaaatttcccccaaacaccattgtcaaaatgg
acaagtgaatataacatcaaatttatgcaagaaaatattccaacgaattttacaatagaa
gacttggaattattccaccattatttatttatcgatattatggaaatgtatgacttgaaa
acatatcctcttgataatactgatggctgtccttattaccactgtatgccgagatttgtt
tacaactttccagatggcgggaaggagatattacctatgtcagttgtaatgatttacctg
attgagaactatcatcgtctcatgacagagtccgaagctcaggttcttaaacaggatgct
gatgcttttcgcgaatttgctgaaaatatgcgtggttccttggttatgaatgcaaataag
aggccatcgacgattcgagtagatctcatcgataggtcggattttttgcctaacagtccg
gatactctctttccgttgatcactcattttggtgtgaggccttcttctcatacttataat
tcaaatgcagaatatcaaaaaatgtccaaagaatacctgcgaatgcgtaaaattcttgcg
atgaagcctcgtgtaagtgcagaggaacgaggaaagcttgcgcaaaaagcttcacaatta
aaagcattgcgtaatgacagtcagctgaagcgggactttgtcatgtcagtgtcatctcgt
gacttctatagtacaggattgtttcctgatattgtacagcatggtttacttctaattctt
gcctgtgcacatgtgcgtttccagtggtccctacaagtatacgagcaagaacgcattcac
tatgtgtttaagaaccgttcacttttggagctagcattaactcacccatcatatcgtaca
aattatggtacaaatagtgaccatgctcgtaatactcttaacaactgtggtgtgcgttct
tccaagcagcgagtgcatgatcgtttggtgcaacagcagttaagcgccaagaagcgagga
ttccataccttattagagatcatgtcgaaattgggttcaaaaaaagcggaacagtcgcca
ttgaaccataacgaacggctggaatttttgggcgatgctgttattgaatttattaccact
attcatttgttttatatgttcagcgaacttgatgaaggcggtttggccacttaccgttca
acaatggttcaaaataaaaatcttgctgtgcttgctaagaagataggcctggatgagttc
atgttgtatgcgcatggacccgatttatgccatgaatctgatcttaggcatgcgatggca
aatgcttttgaagcaatgatggctgcaatttatcttgatgctggaattgatgaatgtgat
agaatttttggtcacgctatgtttgctgattcgaaagaactactttctacatggtttgac
ttagaagaccatcccttgaagcgagataatccaaatggtgatcgccatttgataaatgat
gtaccagcacttcagttgctcacagagttggaaaaaagcatcggagttactttcaaacat
attagagtccttgctaaagctttcactagaagaaatattggcttcaacaacctcactcta
ggccataatcaacgtttggaatttcttggggatacagttctgcagttgataacaacagat
tatctgtataaacactttccgtaccatcatgaaggtcatttgtcaatattgcgcacttgt
ttggttagtaacagaacacagtctgtgatttgtgatgatattggcatgacaaagtatttg
gttacaccaaaagttatgcagaaaagtgggctgccgatattgagagtaaaagataaggct
gatcttgttgaggcattccttggtgctctttacgttgatcgtggattcgattattgcaaa
gttttctgtagaatttgtttctttcctcgtttaaaattttttattattgcccagcattgg
aacgatccgaaatcacagttgcaacagtgttgcttaacactacggcaaatggatggtggt
gaaccagatataccggaatataggacaatagctgttgaaggtccgactaatacgaggata
tacaaggttgccgtttatttcagaaaaaaacgattagcagtagggtgtggacatacaatg
cagttagctcaaatgcgtgctgcggagaatgctttgataaaaagatctgacctttttcca
acgctgaaaaatacaacaaaatacggtgcaatgcagaacagacgtgataatggcccattc
gccaaagtgaaatgcgtgtcaactgaccggacaaaacaacgtaccacgtttaattcaact
catgttttgcagccggatactggatcattactcattgatgatactcaaacttctaggcca
cagatcatttcattgcttgacctcaagttcgatgcagatggttgtctcatttag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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