KEGG   Loa loa (eye worm): LOAG_16648
Entry
LOAG_16648        CDS       T02664                                 
Name
(RefSeq) ATP-dependent RNA helicase DHX8
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
loa  Loa loa (eye worm)
Pathway
loa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:loa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LOAG_16648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:loa03041]
    LOAG_16648
Enzymes [BR:loa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     LOAG_16648
Spliceosome [BR:loa03041]
 Complex C
  Other components
   Step II factors
    LOAG_16648
SSDB
Motif
Pfam: Helicase_C OB_NTP_bind DEAD HA2_C RRM_1 ERCC3_RAD25_C ResIII HA2_N AAA_11
Other DBs
NCBI-GeneID: 9940854
NCBI-ProteinID: XP_020307213
AA seq 1209 aa
MNHEIERFSCGLPVYNIRKDIKNTLCNQGRVLIVVADTGSGKSTQIPQYLVFDGIITPSQ
KILCSQPRKTAVCELAVRVAKETSLINYCLVNVPVYEDGLKPNLNAKINFITEKHLLDCI
RNDPELSQFGCVMIDEVHERTVNTDMCLGMMKKVLRLRSDIKLVICSATLDPEPLLKYFS
EFQAKKLEVPGRQYSIEICYEPPISGCRGIRSLMLDYVDRTVEKVINICEKEAKKQPFED
IFWEDSLETHAAHIMAFLSNPHETLIAEDRLSKRLTELKHSVKVKIVTLYGKMPVEDRIE
IFAPLKSGYHHKVIFATNVGETSITIPGVRYIVDCGLAKVKKFDTTKRKNILELNLISKS
AAKQRAGRAGRTAPGICYRLYSEEQYEEMESTNVPDILLTNLAEVVLYLISVGIMNPEEF
DFIEKPDSSDLMHSLRLLRSLKAIECRETMLVVTQLGKMMQQLPVEPRLAKMVLDSVQYD
LVAEVAVVCACVHVGSLFNRGDKRNKFVLADQKKLSFCEDSGDPMTSLAVFLQHIGTPNN
RFRHWCLENYVNSKHMKSVFSIAYKICKIMSHLTSVNADIHKIDISKARTIIPTLFCRSF
GSNLAMYSGLPERGYYDFNGKKYVFIHPSSALKYNDITPEFIVYECLVHTSNDFVLNVCT
ADPSWLHEIDHNVLEEERKNRLVPYDIRCGTATKRWIMTHKGILQQEVGVECIGKTRRDD
PYRRLQIYVPVKSLPKLKSFIERVIEEKTNVLCRKTREVPILHADYVLHMSGGGKPLEIL
MPGEFCSMYIERSDINWIDDDACKNKLEEYFGKFGKITEFVTFGEEYQKKTGHSCLIRME
NKEVAKRAFIYNIENHCDFNIEPRFGQKYLDTGGNFFHPSAYRLLIRWWRRPSCGYGEIK
LKSRDFDQRMYAFNVISEHFGHFQPSLVSEDFMTRNPNISVDDLYKVKLQSLPLDINNKR
LLHILGPVLDAYDIEFDEVYVVRKKNYPVEDKRDLEKHSQRISDHIIRVAKNAVDGNGYP
FEVKIRAPKHSNDIEFLAFVLFSDMNIGIHVGHALKEAAKNGLTLEMGPVNHMHEAYIQE
MFHYQIKVPRILFNAIFDDLRDIYEIIDHKDIDFNYRSDTYSKLYHLFISGENFEQVPRC
FDFLTNYVVFTIYIFHFARSRCMPTPIHFSSVNKVKAAIDKVIDGYTIKCRDGERVDGDK
LPCHQLLTK
NT seq 3630 nt   +upstreamnt  +downstreamnt
atgaaccatgaaatagaacgtttttcatgcggattgccagtttataacatcaggaaggat
atcaagaacactctgtgtaatcagggaagagtattgattgtagtagcagatactggttcg
ggtaaaagtacacagattccgcaatatctagtattcgatggcattattaccccttcgcaa
aaaattctgtgcagtcagccgcgcaagactgctgtatgcgaactggccgtgagagtggcg
aaggagacgtcgctgattaactactgtttggttaacgtccccgtatatgaagatgggctg
aaacctaatttgaatgcaaaaataaatttcataacagagaagcatcttttggattgtata
cgaaatgatcctgaattatcacaatttggatgcgttatgattgatgaagttcacgaaagg
actgtcaatactgatatgtgtttggggatgatgaaaaaagtgcttagattgcggtcggat
ataaaattggtgatatgttctgcaacactggatccagaaccactattgaaatatttctct
gagtttcaagcaaaaaaactagaagttccaggacgtcagtactctatcgagatttgttac
gagccaccaatttctggatgcaggggaattagaagtttgatgctggattatgtcgaccgc
acagtggaaaaagtcataaatatttgtgagaaggaagctaagaaacagccttttgaagac
attttttgggaagatagcttggagacacatgcagcacatattatggcttttttatcaaat
cctcatgaaacgctgatagctgaagaccgtctctccaagcgactaacggaacttaaacat
agcgtgaaggtgaagatcgtgacattatacgggaagatgccagttgaagatcgaattgaa
atttttgctcctttgaaatctggatatcaccataaggttatctttgcaacaaatgtcggt
gaaacttcgataactattccaggtgttcgatacattgtagattgcgggttagcgaaggtt
aaaaaatttgacactaccaaacgaaaaaatatcttagaactgaatttgatatcgaaatct
gcagcaaaacaacgagctggaagagccggaagaacagcaccagggatttgctatcgcctt
tactcggaagaacaatatgaagaaatggaatccacaaacgttccagacatccttctcacc
aaccttgctgaagtagtgttgtacctgatatcagttggtattatgaaccctgaagagttt
gatttcattgaaaaaccggattcgagtgacctgatgcattcgctgagacttttgaggtct
cttaaagccattgagtgtcgcgaaaccatgctagttgtaactcagctaggtaaaatgatg
caacagttacctgtggagccacgtctagcaaaaatggttttggattctgtacagtacgat
ttagtggctgaagtggcggtcgtctgcgcttgcgttcatgtcgggtcactcttcaaccgc
ggagataagcgaaataagttcgttctagcagatcaaaagaaattatcattctgtgaagac
agtggtgatccaatgacatctttagcggtgttcttgcaacacataggaacaccaaacaat
cgattcagacattggtgtttagagaattatgtgaattcgaagcatatgaaatccgtgttt
agcattgcctataagatctgcaaaattatgtctcaccttacgagtgttaatgcggacata
cacaaaattgatatttcgaaagcacggacaatcattcccactcttttctgtcgatccttt
ggaagtaatttagcaatgtattccggcctaccagagcgtggatattatgattttaatggg
aagaaatacgttttcattcatccgtcatcagctttaaaatacaatgatataactccggaa
tttattgtttatgaatgtttggtccatacgtcaaatgattttgtattgaatgtgtgcact
gcggatccttcttggttgcatgaaattgatcataatgtattggaagaggaaagaaagaac
aggttagtgccatatgatattagatgtggaactgctacgaagagatggattatgacacat
aagggtattcttcaacaggaggtgggagtggaatgtattggaaagacgagacgagatgat
ccataccgtagacttcagatttatgttccagttaaaagtcttccgaagttaaagtcattt
attgaacgggttattgaagaaaaaacaaatgtattatgcagaaaaacgagagaagtgccg
atattgcacgcagattatgtattgcacatgtctggtggcggtaaaccgctggagattcta
atgcctggtgaattctgcagtatgtatattgaaagaagtgacattaattggatagatgat
gatgcgtgtaaaaataagttagaagagtatttcggcaagtttgggaaaatcacggaattc
gtgacctttggagaagagtatcagaagaaaactggacattcgtgcttaattagaatggaa
aataaggaagttgcaaagcgtgcttttatctataatattgaaaatcattgcgattttaat
attgaacctcgctttggacaaaaatatctggatacaggaggcaatttttttcatccatct
gcttaccgattactgattagatggtggcgtagacccagctgtggctatggtgaaataaag
ttgaagtctcgtgatttcgaccagcgaatgtacgctttcaatgtgatttcagaacatttc
ggacattttcaaccttcacttgtgtcagaagattttatgacgagaaatccgaatataagt
gtcgacgatttgtacaaggtaaaactgcagtctcttccactggatattaataacaaacga
ttgcttcatattttggggccggtattggatgcttatgatatagaatttgatgaagtatat
gtggtacgaaagaagaattaccctgttgaagacaagagggatttggagaagcattcccaa
cgaatctctgaccatattataagagtagcgaagaatgcagtagacggtaatggttatcca
ttcgaggttaagatacgcgcaccaaagcatagtaatgacattgaatttttggcatttgtt
ctcttcagtgatatgaatattgggatacatgtgggtcatgcattgaaagaagcagcgaaa
aatggcctaactttggaaatgggaccggtaaaccacatgcacgaagcctatatacaagag
atgtttcattaccaaataaaagtcccgagaattcttttcaatgccattttcgatgatttg
agggatatttatgaaataatcgatcataaggatattgattttaattaccgcagtgacaca
tacagcaaactgtaccatctcttcatttctggagaaaacttcgagcaagtccctcgttgt
tttgattttttgacgaattatgttgtttttacgatatatatttttcattttgcaagatca
cgctgcatgccaacacctatccattttagttccgtaaacaaagttaaagctgcaattgac
aaggtaatcgacgggtatacgatcaaatgtagagatggcgagagagtggacggcgataaa
ttaccctgtcatcaactgttaacaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (43)   

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