KEGG T02664: LOAG

Loa loa (eye worm): LOAG_16672

Entry

LOAG_16672        CDS       T02664

Name

(RefSeq) hypothetical protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

loa Loa loa (eye worm)

Brite

KEGG Orthology (KO) [BR:loa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:loa03016]
    LOAG_16672
Enzymes [BR:loa01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     LOAG_16672
Transfer RNA biogenesis [BR:loa03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    LOAG_16672
Prokaryotic type
   tRNA splicing ligases
    LOAG_16672

SSDB

Motif

Pfam:

RtcB ScdA_N

Other DBs

NCBI-GeneID:

9947315

NCBI-ProteinID:

XP_020307184

AA seq 505 aa
MPRTYDEECSYIERVTDVMYRIKKGFVPNMNVEGRFYVNRALEKLMFEELRNSCRSDGIG
GFLPAVRQVGNVAALPAIVNASVGLPDIHSGYGFAIGNIAAFDVSDPEAVVSPGGVGFDI
NCGVRLIRTNLSEKDVQPLKEQLAQSLFDHIPVGVGSKGIIPIGALQFEECLEMGMDWTL
REGYSWAEDKEHCEEYGRMLQADAAKVSPRAKKRGLPQLGTLGAGNHYGEVQVVDEIYDE
YAASRMGIDRLGQVCVMIHCGSRGLGHQVATDSLVVMEKAMKRDNIIVNDRQLACARINS
VEGQDYLKGMAAAANFAWVNRSCMTFCARQAFAKVFNTSPDDLDMHVIYDVSHNIAKIEE
HLVDGRPKQLCVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTQQGMD
ETFATTCHGAGRSLSRAKSRRNIDFQEVLNQMQAMGISIRVASPKLVMEEAPESYKNVTD
VVNTCHEAGISKKTVKLRPIAVIKG

NT seq 1518 nt +upstreamnt +downstreamnt
atgccacgaacgtatgatgaggaatgcagctatattgaacgcgttacagatgttatgtac
agaatcaaaaagggattcgttccaaatatgaatgtagagggacgcttttatgtcaacaga
gctttagaaaaattgatgtttgaagaattgaggaattcatgtaggtcggatggtatcggc
ggattcttacccgccgtacgccaagttggaaatgtcgcggcactgccagctattgttaat
gcgtctgttggtctgccggacatacattccggttacggctttgctatagggaatattgct
gcattcgatgtttctgatccggaagctgtcgtatccccaggtggcgttggttttgatatt
aactgtggtgtccgtttaattcgaacaaacttatctgagaaagatgttcagccattaaaa
gaacagctcgctcaatcgttatttgatcatattcctgtgggtgttggttcaaagggtatc
attccgataggagctctgcagttcgaggaatgtcttgaaatgggtatggattggactctt
cgtgaaggttattcatgggcagaagataaagaacactgtgaggaatatggacggatgctt
caggctgatgctgcgaaagtttctcctcgtgcgaaaaaaagaggacttccacagttagga
actctgggagctgggaatcattatggtgaagtacaagtcgttgatgaaatatatgatgaa
tacgcagccagtagaatgggcatcgatagactgggtcaggtatgtgtaatgattcattgt
ggtagtcgcggtttgggacaccaagttgctacagattcactagtggttatggaaaaagct
atgaaacgagacaacataattgtcaatgaccgtcaactggcttgtgcaaggattaattct
gttgaaggtcaagattacctcaagggcatggcggcggctgcaaatttcgcgtgggtgaat
cgatcttgcatgactttctgtgcaagacaggcctttgcaaaagtgttcaacacctcgccg
gatgatctcgacatgcatgtgatatatgatgtcagccacaatattgccaaaatagaggag
catcttgtggacgggagaccaaaacagttgtgtgtgcataggaagggctcaacacgtgct
ttccctcctcaccatcctctcatccccgtagattatcaacttacaggacaaccagtatta
attggtggtacgatgggtacgtgtagttacgttttgacaggtacacaacaagggatggac
gaaacatttgctactacttgtcatggagcgggtaggtctttgtcacgtgctaaatcaaga
cgaaacatagactttcaagaagttttgaaccagatgcaagcaatgggtatatcgattcga
gtagcttctccgaaactggttatggaagaagcgccggaatcgtacaaaaatgtgacggat
gtagtgaatacttgtcatgaagctggtatcagcaaaaaaaccgtcaaattacgcccgatt
gctgtgatcaaaggatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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