KEGG   Legionella oakridgensis: Loa_00177
Entry
Loa_00177         CDS       T03928                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lok  Legionella oakridgensis
Brite
KEGG Orthology (KO) [BR:lok00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lok02048]
    Loa_00177 (hsdR)
Enzymes [BR:lok01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Loa_00177 (hsdR)
Prokaryotic defense system [BR:lok02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Loa_00177 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII Crinkler RrnaAD NERD HSDR_N_2
Other DBs
NCBI-ProteinID: AHE65767
UniProt: W0BAZ2
Position
complement(166970..170044)
AA seq 1024 aa
MINEDQVEQLAIQWFQELGYDYLYGPDIAHDGISPLRADYQSVLIESRLNIALTRLNPDA
PASAIEEAKAKLKNPQKVSLIQNNLSFHHMLTQGIGMEVKTEDGWQGERIKLIDFHHPEN
NDFLIVNQFTLKGSKMNRRPDIVVFINGIPIFVIELKNPADESADIFKAYNDLQTYKQEI
EDLFIFNEACIISDGVNARIGSLTASEERYMYWRTIKDEADRPLLSYELEILIRGFFDKT
LLLDYLQYFILFEDNGKSIIKKIAGYHQFHAVREAVNSVIEAAKNKHRKGGVVWHTQGSG
KSISMVCFASKLTKQPEMKNPTLLVVTDRNDLDGQLYGTFCKSTQLLGQQPVQIKSIDTL
REYLGNKPAGGIVFTTIQKFSLKKDEEHFPLLSDRENIVVIADEAHRSQYGFDAMLDDDG
SFKYGYAQHLRDAVPNATFLGFTGTPIEGTDRDTRAVFGDYISIYDIEDAVKDGATVPIY
YESRLAKLDLDSEILKEIDEDVSCLVEDEELANREQFKSKWTALEKLVGAEQRIKQVAHD
LVCHFEERTAAIRGKGMIVAMSRHIAVRMYDAIIAERPDWHSEAPLKGKIKIIMTGTKSD
DTIMQPHLYSKKIKEDIEKRFKDPDDELQLVIVRDMWLTGFDAPCAHTMYIDKPMKAHNL
MQAITRINRVFKDKKGGVVVDYIGIASELKSALKDYANSGGKGRTTIDVAEALAEFLKRL
DIVRNMYHGFDYSAYQTNAHQLLVPAANHILGLDDGKKRYLDEVLALSKAFSLCATTDEA
RACREEVAFFQAIKSVIQKASRSNRKSIDKQVAIKQIIDNAIISEGVEDIFELAGLDKPN
IGILSEEFLEDVAHMPYKNLAVELLEKLINDNIKAKTRCNVILEKKFSERLQASMNKYHN
RAIQTAQVIEELIQMAKDMAKATQHGQDLGLNDDELAFYDALAENESALRELGDVTLKKI
AQELTQKIRNSVSVDWQKRESVRAKMRNHIRIILRRYKYPPDKQHAAIDMVMQQAEVLSD
IWSS
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgattaacgaagatcaagttgaacaactggctatccaatggtttcaagaattgggctat
gactatttatatggtcccgatatcgcccatgatggcataagtccattaagagcagactat
caatctgtcctgattgaaagccgactgaacatagctctgactcggttgaatccagatgcg
cctgcctcagctattgaagaagctaaggcgaaacttaagaatccacaaaaagtcagtctc
attcaaaataacttgtcctttcaccacatgctgacccaaggtatcggaatggaagtgaaa
acggaagatggttggcaaggtgaacggattaaactaattgattttcatcacccagaaaat
aatgattttctgattgtgaaccagtttacgctgaagggtagtaagatgaaccgcaggcca
gacattgtggtgttcattaatggtatccctatctttgttattgagctaaaaaaccctgcg
gatgaatcagctgatatttttaaggcttataacgatttgcaaacctacaaacaggaaatt
gaagatttattcattttcaatgaggcttgcatcatcagtgatggagttaatgcccgaatc
ggttcgctaactgcgtcagaagaacgttacatgtattggcgaaccattaaggatgaagcg
gatagacctttattatcttatgagttggaaattttaattcgtggtttttttgataagact
ttgctattggattatttacaatatttcattttatttgaagataatggtaagtcgattatt
aaaaaaattgctggataccatcagtttcatgcagttagagaagctgtgaattcggtaatt
gaagccgctaagaacaaacaccgtaaaggtggtgtggtctggcatactcaaggttctggt
aaatcaatttccatggtgtgtttcgccagcaaattgaccaagcaacccgaaatgaaaaac
ccaactttgctggtagtaaccgatcgcaatgatctggatggtcagctgtacggcaccttt
tgcaaatcaacacaactgcttggccaacagccagtgcaaataaaaagtattgatactttg
cgcgagtatctgggcaataagcctgctggtggcatagtattcactactattcaaaaattc
tctttgaaaaaggatgaagagcattttcctttgctgtcagatcgagaaaacattgtggtt
attgctgatgaagcacatcgcagtcaatatggttttgatgccatgcttgatgatgatggc
agttttaaatatggctatgctcaacatttacgagatgctgttcccaatgcaacctttctt
ggctttactggaacacccatagaaggcacagatcgcgatacacgggctgtgtttggtgat
tacatttctatttatgatattgaagacgcggttaaggatggcgcaacggttccaatttac
tatgaaagccgtttggccaaacttgatttagattctgaaatcctcaaagaaattgatgag
gatgtgagttgtttggttgaagatgaagaattggcgaatcgagaacaattcaaaagcaaa
tggacggcattggaaaaattggttggggctgaacagcgcataaagcaagtagcgcatgat
ctggtttgtcattttgaagaacgaaccgccgccattcgcggtaagggtatgattgtggcg
atgagtcgacatattgctgttcgtatgtatgatgccatcattgctgaacgcccagactgg
cacagcgaagcccccctcaaaggtaaaataaaaattatcatgacaggtacaaaaagtgac
gataccatcatgcaaccacatttgtattctaaaaaaattaaagaagacattgaaaaaaga
tttaaagatccagacgatgagctgcaactagtgatcgttcgtgatatgtggctcacaggt
ttcgatgccccctgcgcccatacaatgtacatcgacaaacccatgaaagcacacaatctc
atgcaagctattactcggatcaatcgggtgttcaaggataaaaagggcggtgtagtagtt
gattatattggaattgccagtgagttgaagtccgcactcaaagattatgctaactcagga
ggcaaaggacgaactactatagacgtagctgaggcattggctgaatttttaaaacgtctg
gatattgtacgcaatatgtatcatggttttgattattctgcatatcaaacgaatgcccat
caacttctggttcctgcagccaaccatattcttggcttggacgatggcaaaaagcgttat
ttagatgaagttctcgccttatcaaaagcatttagcctatgcgctacaacagacgaggct
agagcatgtcgcgaagaggttgcattttttcaagcaatcaagtcggttatccaaaaagcg
tcccgctcaaatcgaaaaagtattgataaacaggtcgctatcaaacagatcattgataat
gcgattatctctgaaggcgtggaagatattttcgaattagccggattggataaacctaat
attggtattctgtcagaggagtttctggaagatgttgcacacatgccctataaaaacctg
gcagttgagttattagaaaaactcatcaatgacaatatcaaagccaagacccgatgcaac
gtgattctggaaaagaaattcagtgaacggctacaagcatcaatgaacaagtatcacaac
cgtgcaatccaaactgcacaggttatcgaagagttgattcaaatggctaaggacatggct
aaagcaacacagcatggccaagatcttggtttaaacgatgatgaactcgccttttatgat
gcgctggctgaaaatgagagcgcattacgagagctaggtgatgtaactttaaagaaaata
gcgcaggaattgacacaaaaaatccgtaacagtgtaagtgttgattggcaaaagcgggag
agtgtacgcgcaaaaatgcgtaatcacatccgaatcattctcagaagatataagtatccc
ccagataaacagcatgcagctattgatatggtcatgcagcaggctgaggttttaagtgat
atatggagcagctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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