KEGG   Paucilactobacillus oligofermentans: LACOL_1200
Entry
LACOL_1200        CDS       T06755                                 
Symbol
yjbO
Name
(GenBank) Uncharacterized RNA pseudouridine synthase YjbO
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
lol  Paucilactobacillus oligofermentans
Brite
KEGG Orthology (KO) [BR:lol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lol03009]
    LACOL_1200 (yjbO)
Enzymes [BR:lol01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     LACOL_1200 (yjbO)
Ribosome biogenesis [BR:lol03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LACOL_1200 (yjbO)
SSDB
Motif
Pfam: PseudoU_synth_2 NHL
Other DBs
NCBI-ProteinID: CUS26508
Position
I:complement(1223928..1224815)
AA seq 295 aa
MRFSWTYEAKEPIKVRTFLGMNGVTRSLLVVAKYHGGDILLNGEHVWTVNLMQQGDTVTL
VLPNEPATDRVDSCNEAIDIIYEDDDYLILNKPAGVATVPAHHVVTADSLVNRIKGYYQR
QNYPDQVTHVATRLDKNTSGIVIFPKHRFAHAVIDQQLKQHRVVKKYQAIASGNWYVNHG
LIEAAIQRDSESFVKREVGPDGKYAATEYWVKKRYHDATLVDILLHTGRTHQIRVHFKFL
GHPLIGDDMYDGPGGMTRQALHCYYVKFFSPFKNEYIELTCDVADDMKDFLANQQ
NT seq 888 nt   +upstreamnt  +downstreamnt
gtgagattttcttggacatatgaagcaaaagagccaattaaagtaagaacttttttggga
atgaatggagttaccagatctttattagtcgtcgccaagtatcatggtggcgatatttta
ttgaatggtgaacatgtttggaccgttaatttaatgcaacaaggagacacggttacatta
gtcttacccaatgaaccagcaacagatcgagtggatagctgtaatgaagccattgatatt
atttatgaagatgatgattatttaattttgaataagccagcaggagtagcaactgtacca
gcgcaccatgtagtcactgccgatagcttagttaatcgaattaaaggctattatcaacga
caaaattacccggatcaagtaacccatgtggcaactaggctggataaaaatactagtggg
attgttatttttccaaaacatcggtttgcacatgccgtgattgatcagcaattaaagcag
catcgagtggttaaaaaatatcaagcgattgcaagtggtaattggtacgttaatcatgga
ttgattgaggccgcaattcaaagagattcagaatcctttgttaagcgtgaagttggtcca
gatggaaaatatgcagcaaccgaatattgggtaaaaaaaagatatcatgatgctacactt
gtagacatattgttacatactggtcggacacatcaaataagagttcattttaaattttta
ggtcatccactaattggtgatgatatgtatgacggaccaggtggaatgacacgacaggca
ttacactgctattatgttaaattttttagtccgtttaaaaatgaatatattgaattaact
tgtgatgttgccgacgatatgaaagactttttagcgaatcagcaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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