KEGG T01232: lpa

Legionella pneumophila 2300/99 Alcoy (serogroup 1): lpa_00566

Entry

lpa_00566         CDS       T01232

Symbol

rpoA

Name

(GenBank) DNA-directed RNA polymerase subunit alpha

K03040

DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]

Organism

lpa Legionella pneumophila 2300/99 Alcoy (serogroup 1)

Pathway

lpa03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:lpa00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    lpa_00566 (rpoA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpa03021]
    lpa_00566 (rpoA)
   03400 DNA repair and recombination proteins [BR:lpa03400]
    lpa_00566 (rpoA)
Enzymes [BR:lpa01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     lpa_00566 (rpoA)
Transcription machinery [BR:lpa03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     lpa_00566 (rpoA)
DNA repair and recombination proteins [BR:lpa03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      lpa_00566 (rpoA)

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RAD51D_N

Other DBs

NCBI-ProteinID:

ADG23650

Position

444049..445041

AA seq 330 aa
MYTEINEMLTPKVLKVQAESPYKARIVLEPLERGFGHTLGNALRRILLSSMPGSAITEAS
IDGVLHEYSTIEGVQEDVVDLLLNLKSVAIKLTVGNEAQVTLNKEGPCQVTAGDIQLTHG
QEIINPELVIANLNEKGKLNMTLKVERGIGFHNTDAFVRYHEDEIEKKTVGKLKIDNSFS
PVKKVAYFVDSARVENRTDLDKLTIELETNGTIDAEEAIRISASILQRQLHAFVDMKFEE
SRADNKERNDFDPVLLRSVDDLELTVRSANCLKAENIHYIGDLVQRTESELLKTPNLGKK
SLTEIKDVLASRSLSLGMKLENWPPASLGE

NT seq 993 nt +upstreamnt +downstreamnt
atgtatactgaaatcaatgaaatgttgacgcctaaggttctcaaagtacaggccgagtcg
ccctataaagctagaatagttttagaacctttggagcgaggttttggtcacaccctcggc
aatgctttgagaagaatcttattgtcatccatgccaggcagtgccattactgaagcttct
attgatggtgttttgcatgaatatagtactattgaaggtgttcaggaagatgtggttgat
ttgttgcttaacctaaaatcagttgctatcaaattgactgtaggaaacgaagcgcaggtt
accctaaataaagaaggaccatgtcaagttacagctggtgatattcagttgactcatggt
caagaaattattaatccagaacttgtcatagccaatctcaatgaaaagggtaaattaaat
atgactcttaaagttgaaagaggtattggctttcataatactgatgcatttgttcgctat
catgaagatgaaattgagaaaaagacggttggaaagttaaaaattgacaacagtttttct
ccagtgaagaaagtagcttatttcgtcgacagtgcacgtgtagaaaacagaacagattta
gataagcttactattgaattagaaactaacggtactatcgatgctgaagaggcaataaga
atatctgctagtatactgcaaagacagcttcatgcgtttgttgacatgaaatttgaagaa
tcacgtgctgacaataaagagcgtaatgattttgatcctgtattattacgttcagtggat
gatttggagttgactgttcgatcagctaattgtttaaaagctgaaaacattcattatata
ggcgatttggttcaaagaacagaaagtgaattattgaagacacctaatcttggtaagaaa
tcactaactgaaattaaagacgttttagcgtcacgatcattatcgctgggtatgaaactt
gagaattggccgccagcaagccttggcgagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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