KEGG   Lysinibacillus pakistanensis: GDS87_15140
Entry
GDS87_15140       CDS       T06280                                 
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
  KO
K06442  23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
Organism
lpak  Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:lpak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lpak03009]
    GDS87_15140
Enzymes [BR:lpak01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.226  23S rRNA (cytidine1920-2'-O)-methyltransferase
     GDS87_15140
    2.1.1.227  16S rRNA (cytidine1409-2'-O)-methyltransferase
     GDS87_15140
Ribosome biogenesis [BR:lpak03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    GDS87_15140
   23S rRNA modification factors
    GDS87_15140
SSDB
Motif
Pfam: FtsJ S4 Methyltransf_11 Methyltransf_25
Other DBs
NCBI-ProteinID: QGG52188
Position
complement(3150973..3151791)
AA seq 272 aa
MTKQPKERVDILLVERGLSETREKAKRSIMAGLVFSNEIRIDKAGEKIAIDAPLQVKGSD
LKYVSRGGLKLEKALQIFEMSVEGKLMLDIGSSTGGFTDCALQHGARHCYALDVGSNQLA
WKIRSDERVTVMEKTNFRYTTAADLTEGLPDFATIDVSFISLALILPVLKTLLMPGGDVM
ALVKPQFEAGKDKVGKKGIVRDKKVHLEVLEKTAAMATEVGFIVKDASFSPITGGEGNIE
FLFHLVNSVGDEQIPAYTAFDTLVEEAHNSLK
NT seq 819 nt   +upstreamnt  +downstreamnt
atgacaaaacaaccaaaagaacgtgtagatattttacttgtagaacgtgggctaagtgaa
actcgtgaaaaagcaaagcgttccattatggcaggtctcgttttttcaaatgaaattcgt
attgataaggcgggagaaaaaatagccattgatgccccattacaagtaaaaggctctgat
ttaaaatatgttagtcgtggtggcttgaagcttgaaaaggcactacaaatatttgaaatg
tctgtagaggggaagctaatgcttgatattggctcctctacaggaggctttacagattgt
gcattacagcatggtgcaagacattgctatgcattagatgtgggttccaaccaactagcc
tggaagattcgctctgatgaacgtgtcacagtgatggaaaaaacaaatttccgttatacg
actgcagcagatttaacagagggcttgccagattttgcaaccattgatgttagctttatt
tcattagcacttattctacctgtcttaaaaaccctgttgatgcctggaggcgatgtgatg
gcattggtgaagcctcagtttgaagctgggaaagataaggttggtaaaaaaggcatcgtt
agagataaaaaagttcatttagaggtattagaaaagacggcagcaatggcgacagaggtc
ggctttattgtcaaggatgcttcgttttctcctattacagggggcgagggaaatattgaa
tttttattccatttagtgaattctgtaggagatgaacaaattcctgcttatacagctttt
gatacactcgttgaagaagcgcataactcccttaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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