KEGG   Lysinibacillus pakistanensis: GDS87_17600
Entry
GDS87_17600       CDS       T06280                                 
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
lpak  Lysinibacillus pakistanensis
Pathway
lpak00020  Citrate cycle (TCA cycle)
lpak00190  Oxidative phosphorylation
lpak00650  Butanoate metabolism
lpak01100  Metabolic pathways
lpak01110  Biosynthesis of secondary metabolites
lpak01120  Microbial metabolism in diverse environments
lpak01200  Carbon metabolism
Module
lpak_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lpak_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:lpak00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    GDS87_17600 (sdhA)
   00650 Butanoate metabolism
    GDS87_17600 (sdhA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    GDS87_17600 (sdhA)
Enzymes [BR:lpak01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     GDS87_17600 (sdhA)
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 HI0933_like GIDA AlaDh_PNT_C FAD_oxidored ERM_C NAD_binding_8 Phage_int_SAM_1
Other DBs
NCBI-ProteinID: QGG52633
Position
complement(3658246..3660000)
AA seq 584 aa
MAKSKIIVVGGGLAGLMATIKAAEVGTEVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWIHFDDTVYGGDFLANQPPVKGMCDAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTL
MHRTAFSGATTGQQLLYALDEQVRSHEVAGLVNKYEHWEFLGVIIDEDGVCRGIVAQDMR
TEEIKSYRADAVIMATGGPGIIFGKTTNSVINTGSAASIVYQQGASYANGEFIQIHPTAI
PGDDKNRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFVGDDPRKLPMKIFPAVHYSMGGLWV
DYNQMTEIPGLFAAGECDYSQHGANRLGANSLLSAIYGGMVAGPNAVDYVKHLKKHAEDL
PQELYDARVKEEQAKWDAIMKMDGTENAYLLHKELGEMMTATMTVVRYNDQLQDTLKKLD
DLSERWNNININDTQKWSNQGAHFTRQLKNMLILAKVMTQGALLRNESRGAHYKPDFPNR
DDENFLKTTMAKFDPTTGNPIITYQEVDVSLIPPRKRDYSAKGD
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggcgaaaagcaaaataattgttgtcggcggcggtcttgctggtctgatggcaacgatt
aaagcagctgaagttggtactgaagttgatttattctcattagttcctgtaaaacgctca
cactctgtatgtgcgcaaggcggaattaatggtgcggtaaatacaaaaggtgaaggggat
tctccttggattcactttgatgatacagtatatggtggggacttcttagctaaccaacca
ccagttaagggtatgtgtgatgcggctcctggtattattcacttaatggaccgtatgggt
gttatgttcaaccgtacacctgaaggacttcttgatttccgtcgttttggtggtacatta
atgcaccgtacagcattctcaggtgcaacaactggtcaacaattactatatgcactagat
gagcaagttcgttcacacgaagtagctggtttagttaataaatatgagcactgggaattc
cttggtgtcattattgacgaagatggcgtttgtcgtggtattgtagcacaagatatgcgt
actgaagaaattaaatcataccgtgcagacgctgttattatggcgactggtggtcctggt
attatcttcggtaaaacaacaaactctgttattaatacaggctctgctgcttctatcgtt
taccaacaaggtgcttcttatgcgaatggtgaattcattcaaattcatcctacagcgatt
cctggagatgacaaaaaccgtttaatgtcagaatcggctcgtggtgaaggtggacgtatt
tggacttataaagacggtaaaccttggtacttcctagaagaaaaatacccagcttatggt
aacttagtaccacgtgatattgcaacacgtgaaattttcgacgtttgtgtaaaccaaaaa
cttggtatcaatggtgaaaacatggtttacctagatctttctcataaagatccacatgaa
ttggacgttaaacttggtggtatcatcgaaatctacgaaaaattcgttggtgatgaccca
cgtaaattacctatgaaaattttcccagcagttcactactcaatgggtggattatgggtt
gactacaaccaaatgactgaaatacctggtctatttgcagcaggtgaatgtgattactca
caacatggtgcaaaccgtcttggtgcaaactcattattatctgctatctacggtggtatg
gttgcaggaccaaacgcagtagattatgtaaaacatcttaaaaagcatgctgaagatctt
ccacaagagctttacgatgctcgcgtaaaagaagaacaagctaaatgggacgctatcatg
aagatggacggcacagaaaacgcttacttgcttcataaagagcttggtgagatgatgact
gctacgatgacagtagtacgttataacgaccaacttcaagatacattgaaaaaattagat
gatctttctgagcgttggaataacatcaacatcaatgatacacaaaaatggagcaaccaa
ggtgcgcactttacacgtcagcttaaaaatatgttaattcttgcgaaagtaatgacacag
ggtgcattattgcgtaatgaatcacgtggtgctcactataaaccagatttcccgaaccgt
gatgatgaaaacttcttaaaaacaacaatggcgaagtttgatccaactactggtaatcct
atcatcacgtaccaagaagtcgacgtttctttaattccaccacgtaaacgcgactactct
gcgaaaggagactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (34)   

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