KEGG   Leishmania panamensis: LPMP_170740
Entry
LPMP_170740       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
lpan  Leishmania panamensis
Pathway
lpan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LPMP_170740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lpan03041]
    LPMP_170740
   03400 DNA repair and recombination proteins [BR:lpan03400]
    LPMP_170740
Spliceosome [BR:lpan03041]
 Complex B
  Other components
   Prp19 complex
    LPMP_170740
 Complex C
   Prp19-CDC5 complex
    LPMP_170740
DNA repair and recombination proteins [BR:lpan03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    LPMP_170740
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_6 DUF4452
Other DBs
NCBI-GeneID: 22573817
NCBI-ProteinID: XP_010697765
UniProt: A0A088RM47
Position
17:complement(322382..324805)
AA seq 807 aa
MSRLHFKGGAWTNAEDEVMKAALAQYGLRDWERVASMLTKKTATQCRERWENYLDPRLNI
HEAWSLEEEEKLVEFQALFPHKWRLIAEQLTRRTPNHYIRPAWLCEQRYLELKDEQEYYL
KEQQQQLKDVPGGAAGEKQSLESFMAERRRRRIARKTHEERASRADTVSGERCEREMIDM
ATSRLANQDQKKGLRKERQQQLAEAAFLAKLESNREGIESGTLSLRQTRKMKKALEEDWQ
TSGLVDEIAEPDEDDDASGEARDSGENEDDDERFEAIDMYEDQQKAGLVKKQRVLMKDLT
EQQRLIQQRQMDSATDADGDDEATAFSSGSSRARAALTGVNQDLLKQLTSAPMSVPPLPL
ENNASGIRAIAAAGRSVAGASSIAEAAAAEAKEELKSTLTDLFATLPSAARVAPPTALTS
PGTGVPPPPPLPPLKRPREALKPVSVTGEENRDGSYPSEVAQQQAPEQPSRYADSSSVKA
KRSDSGALTDLFDPLDTPAPRKVPKTGIAATAAADRSNGVSRRDEIRAPIPANADSSDAV
ATSTSAADAQHSITFTEVEAEMRMQDARRWVAVECERATAAAATSTTPEDERPTPAEIRA
AQCLVEQELCSVDGAATDSARVANGGNAKRPTQLQHSPPMAAVVRVHTSGEGLQAYSAQV
NVQHALYQLSQRVAAQVREANAILQPLRQEWEQVMSTAMLSPKDMHALHGYVRDDGQLKV
SPTARDSAENHEEDGLALPSVAAYVCERIVGQLQRARLASRFMKELRDREALKMRRDLDA
VEHDLQEAQARERTLQAVYRHTCAQQP
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgtctcgactgcactttaagggcggggcctggacgaacgccgaggatgaggtgatgaag
gcagcactggctcagtacggccttcgggattgggaacgggtggcctcgatgctgaccaag
aagactgccacgcagtgccgcgagcggtgggaaaactacctggacccgcggctgaacatt
cacgaggcgtggagcctcgaggaggaggaaaagctagtcgagttccaggcgctcttcccg
cacaagtggcgcctcattgcggagcagttgacgcggcgtacgccgaatcactacatccgg
ccagcgtggttgtgcgagcagcgctacctggaactcaaggatgagcaagagtactacctg
aaggagcagcagcagcagctcaaagatgtacctggcggagccgcaggtgagaagcagagc
ttagagtccttcatggcggagcggcgtcgacggcgcatcgcgcgcaagacgcatgaggag
cgcgcctccagggccgacaccgtgagcggtgagcgctgcgagagagagatgatcgacatg
gccactagccgcctcgctaatcaggaccagaagaaaggcctccgcaaagagcgtcagcag
cagctggcagaggcagctttcctcgccaagctggagagcaatcgcgagggcatcgagtcc
ggcactctgtcgctgcgccaaactcgaaagatgaagaaggccttggaggaggactggcag
acatctggtctggttgacgaaattgcagagcccgacgaggacgacgacgcgagcggcgag
gcgcgcgactctggcgagaatgaggacgacgatgaacgattcgaggcgatcgacatgtac
gaggatcagcagaaggccggcctcgtgaagaagcagcgggtgctcatgaaggacctgacg
gagcagcagcgccttatccaacagcgacagatggacagcgccacggacgcagacggtgac
gatgaagcgacagcgttttccagcggtagcagtcgcgctcgtgcggcacttacaggagtg
aaccaagatctgctgaagcaactcacatctgcgccgatgtcggtgccaccgttgcctctg
gagaacaatgcgtctggcattcgtgccatcgccgcagctggcaggtccgtcgccggcgcc
agctcaatcgctgaggctgcagcagcggaggcaaaagaagaactcaagagcactctgact
gacctctttgccaccctgccctcggctgctcgggtggcacccccgaccgccttgacgagt
cccggcacgggcgtaccgccaccgcctcccctaccaccgctgaagcgtcctcgtgaagcg
ttgaagccggtgtcagtgactggagaggaaaacagggatggcagctatcctagcgaagtt
gcacagcagcaagcacctgagcaaccttctcgttatgcagacagcagcagcgtcaaagcg
aagcgcagtgacagcggtgctctgacagaccttttcgacccactggacacccctgcgcct
cgcaaggtaccaaagacgggcatcgcggcgaccgcagcagccgaccgcagcaacggcgtt
tcccggagagacgagattcgtgcgccaatccctgcgaatgcggactcttcagatgccgtc
gccaccagcaccagcgctgccgacgcgcagcacagcatcaccttcacagaagttgaggca
gagatgcgcatgcaagatgcacgtcggtgggtcgctgtggagtgcgaacgagcaacggcc
gctgcggcaacaagcacgactcccgaggatgaacggcccacgccggcggagatccgcgcc
gctcagtgccttgtcgagcaggagctgtgctctgtcgatggagcagccactgatagtgcc
cgcgtggccaacggaggaaacgcgaaaagaccaacacagctacagcactcaccaccgatg
gcagcggtcgtgcgtgtgcacacgtctggcgaaggtcttcaggcgtacagtgctcaggtg
aacgtgcagcatgcgttgtaccagctgagtcaacgagttgccgcgcaagtacgggaggcc
aacgcaatcctgcagccgcttcgacaggagtgggaacaggtgatgtcaacggcgatgctc
agcccgaaggacatgcacgcccttcacgggtatgttcgcgacgacggacagttgaaggtc
tcgccgactgcgagggacagcgcagagaatcatgaggaggacggtctggctctgccttcc
gtcgctgcctacgtgtgcgagcgcatcgtcggtcagctgcagcgtgcgcggctggcgtca
cgctttatgaaggaactgcgggaccgtgaggccttgaagatgcgccgcgacttggatgca
gtggagcacgacctgcaggaagcgcaggctcgcgaacgtacgctgcaggccgtataccgt
cacacgtgtgcacaacagccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system