KEGG   Lacticaseibacillus paracasei subsp. paracasei: LBPC_1550
Entry
LBPC_1550         CDS       T04768                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
lpap  Lacticaseibacillus paracasei subsp. paracasei
Pathway
lpap03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LBPC_1550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpap03400]
    LBPC_1550
Enzymes [BR:lpap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LBPC_1550
DNA repair and recombination proteins [BR:lpap03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LBPC_1550
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII PriA_CRR Helicase_C PIF1 AAA_19 zf-ISL3 Zn_ribbon_SprT zinc-ribbons_6 SLFN-g3_helicase AAA_30 HypA UvrD-helicase
Other DBs
NCBI-ProteinID: BAN71846
Position
complement(1637024..1639441)
AA seq 805 aa
MAIVAKVIVDVPTMQTDRPFDYLVPARLEDALQAGMRVWVQFGKGARKVSGMVVSVSDQS
DYDGQLKPLLDVLDPAPVLDHELLKLSKWLAQTTYSFWIACMQTMLPTMLKIDAVKVAEP
VKLTADEQQKYFGTADSLAIGSLNAEQQVAVMKLAQAGKVAISYLKKDRARVKKIFYLIP
QLSLEQAAAEREHVRKNAAKQLKLLTLIGEWAANNQHPALMTVEHQYGLTKPVINQAVEK
GWLKLEGHETYRDPYPELQHQPLTKPLPLTPEQQTIVTQINAAVAERDPKTFLLEGVTGS
GKTEIYLQVIARVLAAGQTALMLVPEIALTPQMVNRVKGRFGTHVAVMHSGLSDGEKYDE
WRRIARGEAQVVVGARSAAFAPLKNIGVFIMDEEHETSYKQDSAPRYHARDVLLKRAQIH
HAPVVLGSATPSLESRARAEKGVYTLLRLPHRINDQPLPPVHIVDMREAFAHGAQEDFSG
PLLDALRIRLQRQEQSVLLLNRRGYSSFVMCRDCGYVAKCPNCDISLTLHMDTHTLKCHY
CGHEEPIPHRCPNCGSDKIRYYGTGTQKVEAKLQQLLPDARILRMDVDTTRRKGGHARIL
DAFGDHQADILLGTQMIAKGLDFPDVTLVGVINADTALGLPDFRASEKTFQLLTQVSGRA
GRADKPGEVFVQTFNPDHYAIQYAKRQDYEGFFRQEMAIRHRGNYPPYFYSTKIAVSHVD
ETQAAKAIFSLAKELREHLSDQVIMLGPTPGPIARLKNRYIYQIVLKYKHEPALAATLQH
ILEETQQSSRHGFLVAIDPEPLAFV
NT seq 2418 nt   +upstreamnt  +downstreamnt
ttggcaattgttgccaaggtgatcgtggatgtgcccacgatgcaaacagatcgaccgttt
gattatcttgtacctgcgcgcttagaagacgctttgcaggcgggaatgcgggtctgggtc
cagtttggcaaaggtgcgcgaaaagtgagcggcatggtcgtgtcagtctccgaccaaagc
gactatgacggtcaattgaaaccattgttagatgtccttgatccggccccggttttggat
cacgaattattaaagctatcgaagtggttggcgcaaacaacgtattctttttggattgcg
tgcatgcagacaatgttgccaactatgttgaaaatcgatgcggtaaaagttgctgaaccg
gttaagctgacggctgatgaacaacaaaaatattttggaacggctgacagtctggcgatc
ggtagcttgaacgctgaacagcaagttgcagtgatgaaattggcgcaagcaggtaaagtt
gctatttcatatttaaaaaaggatcgtgctcgggttaaaaaaatcttttacttgatcccg
caattatcactggagcaagcggctgccgagcgtgaacacgtgcgtaaaaacgccgccaag
caacttaaactgttaactttaattggtgaatgggctgctaacaatcagcatcctgctttg
atgaccgttgaacatcaatatggcctgacaaagccggtgattaatcaggcagtcgaaaaa
ggctggctgaagcttgaaggccacgagacttaccgcgatccttatccggaactgcagcat
caaccgttgacgaagccgttgccgctcacgccagaacaacagacgattgtgacgcaaatt
aacgctgccgttgccgaaagggatcctaaaacatttttgttagaaggggtcaccggctct
ggcaaaacagaaatctatttgcaggtgattgcacgagttttagccgcgggacagacagct
ttgatgcttgtgccggaaattgcgttgacgccgcaaatggtcaatcgcgtaaaaggccgt
tttgggacgcatgttgccgtgatgcactctggcttgtctgatggcgaaaagtatgatgaa
tggcgccgaattgcgcgcggcgaggctcaggtcgttgtcggcgcacgatcggcagcattt
gcgccgttaaaaaacatcggcgttttcatcatggatgaagagcacgagaccagctacaaa
caagattcggcgccacgctatcacgcccgtgacgttttgttaaaacgggcacagattcac
catgcaccggttgtgttgggctcagcaacaccttcattggagtcgcgcgctcgagcggaa
aagggcgtttatacactgctgcggctgccgcatcggattaacgatcaaccattaccgcca
gtgcatattgttgatatgcgggaagcctttgcgcacggcgcgcaagaggacttttcgggc
ccgctgcttgacgccttgagaattcgactacagcgacaggaacaaagtgtgttgctcttg
aatcggcgcggttattcaagttttgtgatgtgtcgcgattgcggctatgtggcaaaatgt
ccgaactgtgacattagtctgacgctgcacatggacacacacaccttgaaatgtcattat
tgcggccatgaggaaccgattccacatcgttgcccaaactgcggttctgataaaattcgc
tattacggtactggcacccaaaaggtcgaggcgaagttgcagcagttgctgccagatgcc
cgaatcttgcgaatggatgttgataccactcggcgcaaaggtggccatgcgcggatctta
gatgcgtttggtgaccatcaggccgatatcttactgggtacgcaaatgatcgcaaaggga
ctggattttcccgatgtgactttagttggtgtcattaatgcggacacagcgctcggcctg
ccggattttcgggcgagtgagaagacctttcagttgctcacacaggtgagtggccgggct
ggtcgggcggacaaacccggtgaagtcttcgttcagaccttcaatccagatcattatgcc
attcaatacgccaaacggcaggactacgaaggctttttccggcaagagatggccattcgg
catcgcggcaattatccaccatatttttattcaacgaaaatcgctgtgagccatgttgat
gaaacacaggcggctaaggctatcttttctttggcaaaagaattacgtgagcatctatcc
gatcaggtcatcatgcttggcccgacaccaggaccgattgctcgtttgaaaaatcgctat
atttaccaaatcgttctaaaatataaacacgagccggcgttagcggcaaccctgcagcat
attttggaagagacccagcaaagcagtcgtcacggctttttagtcgcgattgatccagaa
ccgttggcatttgtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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