KEGG   Lentilactobacillus parabuchneri: FAM21731_01418
Entry
FAM21731_01418    CDS       T04617                                 
Name
(GenBank) bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
lpar  Lentilactobacillus parabuchneri
Pathway
lpar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lpar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FAM21731_01418
  09124 Replication and repair
   03420 Nucleotide excision repair
    FAM21731_01418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpar03021]
    FAM21731_01418
   03400 DNA repair and recombination proteins [BR:lpar03400]
    FAM21731_01418
Enzymes [BR:lpar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     FAM21731_01418
Transcription machinery [BR:lpar03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FAM21731_01418
DNA repair and recombination proteins [BR:lpar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FAM21731_01418
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 PDDEXK_1 DEAD ResIII FliJ PhoH PCRF
Other DBs
NCBI-ProteinID: APR07598
Position
complement(1488482..1490842)
AA seq 786 aa
MAVHQVGIRELVEFLLRTGDLSPVISSENTAQEGSRIHRKIQHSRPSSYQSEVALKTSIQ
YLDDEYVISGRADGIDERDGKPLIEEIKTSDLEFQSVPDSTLQLYWAQVKVYAYIVMHQA
DIKSVDLQLTYVQTPDEKITTKTLTISKTESELFFTALVTEFEQWIQLRHELDERRITSA
KQLKFPFADYRPGQHKLATNIYKTILLEKHLFVEAPTGTGKTISTLFPAIKSMGEELISR
VFYFTAKQSTRHVAENTISLMAEKGLTLKSITLTAKDKITFPEEKDVPPEKNPYMVGYYD
RVRPAIKDLIQHVDQITKDTIQAYAQKHKVDPFEFSLDVSLFCDIIICDYNYLFDPQVHL
QRFFSVPDKSNCFLVDEVHNLVQRSREMYSATLESSPIDPLIRQLSRKKASNEKVIKRLQ
SLKRSFKRYSKPASETVDKQVAQLAPLDNFNNTLETLIETIHQWLATQTPSDTVDAVVDY
YLECRRYFLISTFYDETYRTRMIIGDHTIIFRQFCMDPSKQIKASLNLGRAAILFSATLS
PISYYQQVLGNEEDSLCMISHSSFPEENCQVVIANNINTLYANRENSLKPICDTIKTLIS
QKTGHYMMFFPSMAYLNATLSKFVELYPDVTVINQKPDMDNASRTEFLDNFRSDDHKTKV
GFALLGGIFSEGIDLKNDQLIGVGIVSVGLPGMNKESDLIRDYFDSLNGQGFSFAYQLPG
FNNVSQAAGRVIRTDEDKGVIVLMDQRFNQTRYRSIFPKNWSNIKVTQNSDQLKNVLHHF
WQNGNT
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggccgtgcatcaagttggtatcagagagttagttgaatttctacttcggaccggtgac
ttgagtcccgtcatcagcagtgaaaatacggctcaggaaggcagccgcattcaccgcaag
attcaacacagccgcccgtcctcataccaatccgaggttgccctgaaaacgtcgattcaa
tacctggacgacgaatacgtcattagtggccgcgctgacggcattgatgagcgggacggc
aagcctttgatcgaagaaatcaagacctctgacctggaatttcagtcagttcccgactca
acgcttcagctgtattgggcccaagtcaaggtgtacgcctacatcgtcatgcaccaggca
gacattaagtcagtcgaccttcagctcacctatgtccagacccccgacgaaaaaatcacg
accaagaccctgacaatcagtaagaccgaatcggaactcttttttacggctctcgtaacc
gaatttgagcagtggattcagttgcggcatgaacttgacgagcggcgaatcacctccgcc
aagcaactcaagtttcccttcgcggattaccgtcccggccaacacaagctggctacgaac
atttataagacaattttgctggaaaagcatttatttgtggaggccccaaccggaaccggc
aagaccatttcaaccctctttccggccattaaatccatgggcgaagaattgatcagccgc
gttttttatttcacggccaaacaaagtaccagacacgtcgcggaaaacacgatttcgttg
atggcagaaaaggggctcaccctcaaaagcatcactttaaccgccaaggataagattacc
ttcccggaggaaaaagacgttccgccggaaaaaaatccatacatggtgggctactacgat
cgtgtcagaccagctatcaaggatctcattcaacacgttgatcaaatcactaaagatacc
attcaagcatacgcgcaaaagcacaaggtggaccctttcgaattttcactcgacgtcagc
ttattttgtgacatcatcatctgcgactataactacctcttcgatccccaggtgcatttg
cagcgattcttttcagtcccggataaatcaaactgttttctggtcgacgaagttcacaac
ctcgtccaacggtcccgggaaatgtattcagccaccttggaatcatccccaattgaccct
ttaatccgccagctttcaaggaaaaaagccagcaatgaaaaggtgattaaacgcctccag
tcgctcaagcgatcatttaaacgttatagcaaacccgcatcagaaaccgtcgataagcag
gttgcccaactggcaccgttggataatttcaataatacgttagaaaccttaattgaaacg
atccaccaatggttggcaactcagacccccagcgacacggtcgatgccgttgtggactac
tatttggaatgtcggcgctactttttgatcagtacgttttacgatgaaacgtatcgaacg
aggatgattatcggcgatcacaccatcatttttaggcagttttgtatggatcccagcaag
caaattaaggccagcttgaatctgggacgtgccgcaattttgttttcggctacactcagt
cccatttcctattaccagcaagttttgggaaacgaagaagacagtttgtgcatgatctct
cattcatcgtttcccgaggaaaactgtcaggtagttatcgctaataacattaataccctg
tatgccaaccgggagaacagtctaaaaccaatttgtgacacaattaagacgttgatttcc
cagaaaaccgggcattacatgatgttcttcccgtcgatggcctatctaaacgcgacctta
agcaaatttgtcgaactttacccagacgtaacggtcattaatcaaaagcccgacatggac
aacgcgtcacgaaccgaattcttagacaacttccgttctgatgatcacaagaccaaagtt
ggcttcgcccttttaggtggcatcttttctgaaggcatcgatttgaaaaatgaccaactg
attggcgtgggcatcgtcagtgtcgggcttcccggaatgaataaagaatccgatttaatc
cgtgattactttgattcactcaatggccagggcttttcgtttgcctaccaacttcccggc
ttcaacaatgtcagccaagctgccgggcgggtgattcgaactgacgaggataaaggtgtg
atcgtcttgatggaccagcgatttaatcagacgcgctaccggagcattttccccaagaac
tggtccaacatcaaagtcactcaaaattcggatcaactaaaaaatgttctgcatcatttc
tggcaaaacggcaatacgtaa

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