KEGG   Lactiplantibacillus plantarum B21: SH83_03170
Entry
SH83_03170        CDS       T03680                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lpb  Lactiplantibacillus plantarum B21
Pathway
lpb02020  Two-component system
lpb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lpb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SH83_03170
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SH83_03170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpb03021]
    SH83_03170
Transcription machinery [BR:lpb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SH83_03170
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38
Other DBs
NCBI-ProteinID: AJO73396
UniProt: A0A0G9FBF6
Position
694838..696175
AA seq 445 aa
MALGPGFRQQQRQSQKLAMTQRLQQSIQMLQFNVEELRDFLTQKALENPLIDVDTNWNNN
HASLNAAKNVTTKADFIERVSTSNQHSLFEYLLDQIHLTMRDTHLRQIVLYLIEYVDVNG
YLRIDERQVRQETKATPIELLDAITLLQQLDPPGVGARSLQEALMLQTENDDHAPNLAYI
VLEESFDELVNRQWDLLAKKYQVTLADISSIYDYVRTLTPVPGAAIGQETTGYIFPDLVV
TNQGGQLALRTASMAQPVVKFRSRYYQQMGQHDDQEVTEYLKEKKSEYDWIANSLQQREA
TIFRVGTAIIERQADFFLEKTTDLRPLLLRDVAQQLKVHESTISRSINGKYIQTDFGMFE
LKRFFTKAVSKRPTGGKIVSADSVQHRIVTLIEQENKEKPLSDQKIVQILNAENVELSRR
TVAKYRENLNIPSSSRRKQYLRTER
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggcactgggaccaggatttcgccagcaacagcggcaatcacagaagttagcgatgacc
cagcgactacaacaatccattcagatgttgcagtttaatgtggaagaactaagagatttt
ctaacgcaaaaagcattagaaaacccattgatcgatgtggatacaaattggaataataat
cacgccagtttgaacgcagccaaaaatgtaaccactaaggcggatttcattgagcgtgtg
tcgacctctaatcagcattcgttatttgaatacttgttggatcagattcacctaacgatg
cgtgatacccatttgcgtcagattgtcctttatttaattgagtacgttgacgtgaatggt
tatttgcggattgatgagaggcaggttcggcaagaaactaaggcaacgccaattgagttg
ttggatgcaattaccttattacaacaacttgatccgccgggtgttggggcccggagcttg
caagaagcgctgatgttgcagacagaaaatgatgaccatgcaccgaacttagcctatatt
gtcttagaagaaagttttgacgagctggttaatcgacaatgggacttgttggctaagaag
tatcaggtgacgcttgcggacatttcaagtatttatgattatgtgcgaacactaacaccc
gtacccggtgcggcaatcgggcaggagacgaccgggtacatctttcccgatttagtggtg
acgaatcagggaggccagctggcattgcgaaccgcatccatggctcaaccggtggttaaa
ttccgcagtcggtattatcagcagatggggcagcatgatgatcaggaagttacggaatat
ttgaaagaaaagaaaagtgagtatgactggattgctaacagtttgcagcaacgcgaggca
accatttttcgagtgggaacggccattatcgagcgtcaagcagacttcttcttggaaaaa
acgacggatttacggccactattgttacgagatgttgcccaacagttaaaagtgcatgaa
tcaacaatcagtcgaagtattaatggaaagtacattcaaacggacttcggtatgtttgaa
cttaaacgtttctttaccaaagcggtcagtaaacgtcccactggtggcaaaatcgtttcg
gccgacagtgttcaacaccgaattgtgaccttgatcgaacaggaaaataaagaaaaaccg
ctttcagaccaaaaaattgttcagattcttaatgcggaaaatgtcgaactttctcggcgg
acagtggcgaaatatcgcgaaaatcttaatattccgtcatcatcaaggcgaaaacaatac
ttgagaaccgaacgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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