KEGG   Legionella pneumophila Corby: LPC_0010
Entry
LPC_0010          CDS       T00532                                 
Symbol
hfq
Name
(GenBank) host factor-I protein for bacteriophage Q beta replication
  KO
K03666  host factor-I protein
Organism
lpc  Legionella pneumophila Corby
Pathway
lpc02024  Quorum sensing
lpc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPC_0010 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LPC_0010 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpc03019]
    LPC_0010 (hfq)
   03036 Chromosome and associated proteins [BR:lpc03036]
    LPC_0010 (hfq)
Messenger RNA biogenesis [BR:lpc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LPC_0010 (hfq)
Chromosome and associated proteins [BR:lpc03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LPC_0010 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ABQ54010
UniProt: A5I9G0
Position
13054..13311
AA seq 85 aa
MSKNHLLQDPFLNELRKEKVPVSVFLVNGIKLHGIIDSFDQYVVMLKNSITQMVYKHAIS
TVVPSRMVKIPAEESSGEEEGTVAD
NT seq 258 nt   +upstreamnt  +downstreamnt
atgtctaaaaatcatttactacaagaccctttcctaaatgaattgcgcaaggaaaaggta
cctgtttcagtgttcctggtcaatggtattaaattgcatgggataatcgattcttttgat
caatatgtggtgatgcttaaaaactccataacccaaatggtttataaacacgccatttca
acagttgttccttctcgaatggtcaaaattcctgctgaggaaagctctggtgaggaagaa
ggaactgtggcagactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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