KEGG   Secundilactobacillus paracollinoides: AYR62_14080
Entry
AYR62_14080       CDS       T04675                                 
Name
(GenBank) hypothetical protein
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
lpd  Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:lpd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lpd02048]
    AYR62_14080
Prokaryotic defense system [BR:lpd02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    AYR62_14080
SSDB
Motif
Pfam: HNH_4 Cas9_a
Other DBs
NCBI-ProteinID: ANZ65094
Position
3131414..3134689
AA seq 1091 aa
MGVLLSLNIDIAAVGYAVLQTDERGKPERILKLNTVQFTPAENPKDGASLALPARQRRHA
RRCNRRTKFRKQRVRQLFLKYGLLTTADMTAYFNQQLQPADIWQLRVQGLDGELTSRELF
AVLYYLAGHRGFRSNARSETTGQSPAELGRLLQSIQATKQVFQAGHYRTFGEMLVRDPRY
RACKHNKDYQADYLVHPLREWIVSEARLIINHQRQSDPRLSRAFQKDYIALLKSQRDFDT
GPSAPSRFGGNLIEKMVGNDPLNACEKRAAKATRTYCEFKLMKTVNDIQLVGGDYRGLTA
LDVSQRHCLLALARQQQRLDFYQARQALNLPAEVRFNQVAYQDEPVKKAEKHTVIVDFKA
INEIQTALGSSLYADDTDLIDRVGTILTNYSSDQSKQQALEELDVLSDEEITRLAALNYT
SYSQYSLKTMRQLWPFLWRGRSFAVSLETAGYGLNDQRLDRVALYDQLTNPVAKRAVVMA
LKVVKAVQAAYGHLDALRFSVAPAMTLPFQKRVDANKRQQQTVKAHEKLVATLNQLGIPA
NGENILKHQLFTEQQGIDPYTGQPIDPERLFNDAYYQIDHIIPYSASFDDRYCNKVVTAT
ANNQQKGNQLPLAFLHSEHHQRFIAWVTDTITSYRKRQHLLKTEITARDQSRWRTRHLGD
DRQFSQLLSRYFTQNLRFRAGYQEPVAAVSYPATARLLQRFSVPLPSESTLRYAAQAVVT
GCFTPAYIDLLATYSTAREISHNEALWSAFSQLTDSDGQLNPSYLQVKNQVPLPWPDFRA
ELTGRLSDDPATTMIQRSWHTYQHREITQLKPVFAIRAPHHSIGGEVHKETVFSPKHYDQ
TGEVTQRVAISSLKLAKNGDQITGAKGIYALAPDGSNQVVYTAVKVALTANGGSGKQAFP
ENQLVISTGSQDMVVTKVKVTKKATLLTPVHQGRGVASNSHMVRVDIYRNAKGYAGVPLY
PADFKQAALPNRVITARKPHDQWQLVTANDAFICALYPDDSVHIERQHPIRLKYPDGHTD
EVTSLDCYFGKINISNNSVTFKAHDGSYVIQEVALSSLDTLQLYQQDYLGNRHLVRSKRR
ADKTSAMVKTR
NT seq 3276 nt   +upstreamnt  +downstreamnt
atgggggttttactgagtttgaacattgatattgcggcggtgggctacgcggtgttgcag
acggatgagcgggggaagcctgagcgcatcttgaaactcaacacggtgcagtttacgccg
gcggaaaatccaaaggacggcgcgtcactggcattaccagcacgacaacgccgccatgca
cgacgctgtaaccggcgcaccaaattccggaaacagcgggttagacagttatttcttaag
tatgggttgttgacgaccgcggacatgacggcctactttaatcagcaactgcaaccagcg
gacatttggcagctgcgggttcagggtctggacggagaattgacgagtcgtgagttgttt
gcggtgctgtactatttggccggtcaccgcggctttaggtctaatgcgcgttcggagacg
actggtcaatcaccagctgagttagggcgactgttgcagtcgattcaggcaacgaagcag
gtctttcaagcgggtcattaccggacgtttggcgagatgctggtacgcgacccgcggtat
cgcgcctgtaaacataataaggattaccaagcagactatttggtgcatccgttgcgcgag
tggatcgtgtcggaggcgcggttgatcatcaatcaccagcgccaaagcgacccgcggctg
tcacgggcgtttcagaaagactacatagcactacttaagagccagcgcgactttgatacg
ggaccgagtgccccgagccgctttggcgggaatttgattgagaaaatggtgggcaatgac
ccgctgaatgcgtgtgaaaagcgcgcggcaaaggccacgagaacctattgcgagtttaag
ttaatgaaaacggtaaacgatatccagttagtgggcggcgactaccggggcctgacggcg
ttggatgtcagtcagcgccactgcctcttggccctggcccggcaacagcagcgacttgat
ttctaccaggctcggcaggcgcttaatttaccagcggaagtcaggtttaatcaggtcgcc
taccaggacgaaccggttaaaaaggccgaaaaacacactgttatcgttgattttaaggca
atcaatgagattcaaacggcgcttggcagcagtttgtacgccgacgacaccgatctgatc
gaccgggtgggcaccatcctcaccaattactcgagcgaccagtcgaaacaacaagcactg
gaagagctcgacgtgttgtctgacgaagagatcacgcgattggccgccctcaattacacg
tcgtacagccagtattcgttaaaaacgatgcggcagctttggccgtttctgtggcgcggg
cgcagtttcgcagtgtcacttgagacagcggggtacggtctaaacgaccagcgactcgac
cgcgtcgccctctatgatcagctgacgaatccggtggctaagcgcgccgttgtcatggcg
ctcaaggtggtcaaagccgttcaagctgcctatggtcatctggacgcgcttcggtttagc
gtggcgccagcgatgaccctgccgtttcaaaaacgcgtcgatgccaacaagcgccaacag
cagacggtgaaagctcacgagaagttagtggcaacgctgaatcagttaggcattccggca
aacggtgaaaatattttgaagcaccagctgtttaccgagcagcagggtattgacccctac
accggtcagcccattgatccagaacggttgtttaacgatgcgtactaccagatcgaccat
atcatcccgtattcggctagtttcgatgaccgctactgcaataaagtggttacggcaacg
gccaataatcagcagaagggcaaccaactgccacttgcatttctacatagtgagcaccac
caaagatttatcgcctgggtcaccgacaccatcacgtcgtatcgcaaacggcaacacctg
cttaagacggaaattaccgctcgtgatcagtcccgttggcgcacgcggcaccttggcgat
gaccgtcaattcagtcagttactcagtcgttattttacacaaaatttgcgtttccgggcc
ggctatcaggaacccgttgcggctgtgagttatccggcaacagccagattgctgcaacgg
ttcagcgtgccgctgcccagtgaatcaacactgcggtacgccgctcaagccgtcgtcacg
gggtgcttcacaccagcgtatattgatctgctggccacctatagtacggcgcgggagatc
agccacaacgaagccctgtggtccgctttcagtcagttgaccgacagcgatgggcagctg
aatccaagttatctacaagtgaaaaatcaggtgccgctgccctggccagactttcgtgct
gaactcaccggccgattgtctgatgatccggcaacaacaatgattcaacgcagttggcac
acctatcaacatcgtgaaattacccagcttaaaccggttttcgcaatccgggcaccgcac
cacagtatcggcggtgaagtgcacaaggaaacggtgttctcacccaagcattatgaccaa
acgggggaagtgacccagcgcgttgccatcagcagtctgaaactggcaaagaatggcgac
cagattaccggcgctaaagggatctatgcgttagcgcctgatggcagtaatcaggttgtc
tacacggcagtgaaggtggcactaacagccaatggcggcagcggcaagcaagcattcccg
gaaaaccagctggtcatttcaacggggtcgcaggacatggtcgtcacgaaggtcaaggtg
accaagaaggccacgctgctgacgccggttcaccagggacgcggggtcgccagcaactcc
cacatggttcgcgtggacatctaccgcaacgccaaaggatacgctggcgtgccgctgtac
ccggctgattttaagcaggcagcgttgcccaaccgcgtcatcaccgcccgcaagccgcat
gaccagtggcagctggtcacggccaacgacgccttcatctgcgccctataccctgatgat
tccgtccacatcgaacggcagcacccgatccggttaaagtatccggatgggcacaccgat
gaggtcaccagcctcgactgttactttggcaagatcaatatttcaaacaacagcgtaacg
tttaaggcccacgacggcagttacgtcattcaagaagtggcgctgtcgagtttggatacg
ctgcagctgtatcagcaggattatcttgggaaccgccatttagtgcgttcgaaacggcgg
gctgataaaacgagtgcaatggtgaagacgcgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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