KEGG T02174: LPV

Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1): LPV_2934

Entry

LPV_2934          CDS       T02174

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

lph Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1)

Brite

KEGG Orthology (KO) [BR:lph00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lph03032]
    LPV_2934 (topA)
   03400 DNA repair and recombination proteins [BR:lph03400]
    LPV_2934 (topA)
Enzymes [BR:lph01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     LPV_2934 (topA)
DNA replication proteins [BR:lph03032]
Prokaryotic type
  DNA Topoisomerases
   LPV_2934 (topA)
DNA repair and recombination proteins [BR:lph03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LPV_2934 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim DNMT1-RFD Toprim_4

Other DBs

NCBI-ProteinID:

CCD09976

Position

3018500..3020779

AA seq 759 aa
MSKHLVIVESPAKAKTIQKYLGNDYDVLASYGHVRDLPARKGSVNPEKHFSMTYVPIEKN
ARHIDTIAKTLKKSDSLLLATDPDREGEAISWHIFELMKERNLLKDKSVHRIFFNEITKA
AIQDAINHPRSISMDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIV
EREEEIERFIAQEYWKIIAKCAHASTEFEARLTHYNEEKLQQFSVTQQEQAHEIKKQLIA
QAQGFLTVAQIDKKQRKRKPSPPFITSTLQQEAARKLGFTARKTMMVAQQLYEGIDIGTG
TVGLITYMRTDSVNLAKEAIDEIRDYITQRYKGDNCPNSPRIYKTKSKNAQEAHEAIRPT
SIKRTPEMVQGSLTSDQLKLYSLIWKRTVASQMADAILDTVSVDFSCGKGNTFRANGSTI
AFPGFLSVYEEGRDDSKDEDNEDKILPAFNVGEKIKVSDIETNQHFTEPPPRYSEATLVK
ALEEYDIGRPSTYASIIHTLQQREYVVVEKKRFLPTDVGRIVNRFLTNYFTRYVDYQFTA
GLEDTLDAIARGEKDWIPVLEEFWQPFVQQIQNIDEQVQRKDVTTELLEEKCPKCQKPLS
IRLGKRGRFIGCTGYPDCDYTQDISNPEGEKSEPEVVEGRSCPLCHGALHIKTGRYGKFI
GCSNYPECKHMEPLEKPSDTGVTCPKCSQAKILQRKSRKGKIFYSCGNYPKCDYALWNEP
VDLPCPKCAWPILTLKESKKFGRQILCPREGCDYSAKED

NT seq 2280 nt +upstreamnt +downstreamnt
atgagtaaacacttggtgatcgtcgagtcgcccgcgaaagctaaaacaatacagaaatat
ttaggaaatgactatgacgtgttagcgtcttatggtcatgtgcgtgatctgcctgctcgt
aaagggtcagtaaaccctgaaaaacatttttccatgacttatgttcctattgaaaaaaat
gcgagacacattgatacgatagcaaaaactcttaaaaaatcagactctctactgctggca
actgaccctgatagagagggagaagctatctcgtggcatatttttgaattaatgaaagaa
cgcaaccttttaaaggacaaatcagttcatcgaatcttttttaatgaaattacaaaagca
gcaatccaggatgcaattaatcatcctcgctccatatccatggatttggtgaatgctcaa
caagcccgacgtgctcttgattatctggttggctttaacctgtcccctttgctatggaaa
aagattcggcgaggattatcggccggacgagtacaaagccctgcccttaggttaattgtt
gagcgagaagaggaaattgaacgtttcattgctcaggaatactggaaaataatcgcaaaa
tgcgctcatgccagcaccgaatttgaagcacgactgacccattataacgaagagaaactt
caacagttttcagtcactcaacaagaacaagcccatgaaataaaaaagcaactgatagca
caagcacaaggctttttaaccgttgctcaaattgataaaaaacagcgtaaacgtaagcca
tctcccccctttattacctctaccttgcaacaagaagccgccagaaaattaggtttcacc
gcacgaaaaaccatgatggtcgcccagcaattatatgaaggtattgatataggcacagga
acggtgggtttaatcacttacatgcgtactgattcagtcaacctagcaaaggaagcgatt
gacgaaatacgcgactatatcacacaacgttataagggagataattgcccaaattctccc
agaatttacaaaactaaatccaaaaacgcacaggaagcacatgaagccattaggccaact
tccatcaaaagaactccagaaatggtgcaaggttccctgacaagcgatcaattgaaactc
tatagcttaatctggaaacgcacagtggcctcccagatggctgatgccatcctggatacg
gtgagcgtggattttagctgtggtaaagggaataccttcagagccaatggttcaacaata
gcctttcctggcttcctttctgtctatgaagaaggacgagatgattctaaagacgaagac
aatgaagataaaattttacctgctttcaatgtaggtgaaaaaataaaagtatcggatatt
gaaaccaatcagcattttaccgagccacctccgagatattctgaagcaactttggttaaa
gctcttgaagaatacgatataggcagaccatctacttatgcctctatcattcatactttg
caacagcgcgaatacgtggtagttgaaaaaaaacgttttttgcccactgacgtgggtaga
attgtcaatcgatttctaaccaactattttactcgctatgtcgactatcagtttaccgct
ggccttgaagacacactggatgccatcgcgcgtggagaaaaggattggatccctgttctg
gaagagttctggcaacctttcgtccagcaaattcagaatatagatgaacaagtgcaaaga
aaggatgttactacggaattattagaagaaaaatgtcctaaatgtcaaaagccattgtcc
atcaggctcggcaagagaggacgctttattggctgcacaggatatccggattgcgattac
actcaggatataagcaatccagaaggagaaaaatcagaacctgaagtcgtggaaggcaga
agctgccccctgtgtcatggcgccttgcatattaaaaccggtcgctatggaaaatttatc
gggtgcagcaattatcctgaatgcaaacatatggaacctttagaaaaaccctccgatact
ggcgtcacatgccctaaatgcagccaggcgaaaattctgcagcggaaatcaagaaaaggg
aaaatcttttattcctgtggaaattacccaaaatgcgattacgctctgtggaatgaacct
gttgatttgccttgtcctaaatgtgcatggccaatcttaaccttaaaagaaagtaaaaaa
tttggtcgtcaaattctttgtcctcgtgaaggttgtgattactctgccaaagaagactaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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