KEGG   Limnochorda pilosa: LIP_1588
Entry
LIP_1588          CDS       T04150                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
lpil  Limnochorda pilosa
Pathway
lpil03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LIP_1588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpil03400]
    LIP_1588
Enzymes [BR:lpil01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LIP_1588
DNA repair and recombination proteins [BR:lpil03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LIP_1588
SSDB
Motif
Pfam: PriA_3primeBD DEAD ResIII PriA_C Helicase_C PriA_CRR zf-CHY TrwB_AAD_bind AAA_22 AAA_19 AAA_16 nSTAND3 AAA_30 PIF1 Viral_helicase1 zf-Sec23_Sec24 zinc-ribbons_6
Other DBs
NCBI-ProteinID: BAS27435
UniProt: A0A0K2SK09
Position
1690543..1692744
AA seq 733 aa
MAVDLPLPGAMESLDYAVPERLRPQVRLGTRVQVPVRARAVQGWVVAVHQGPPTRPLREV
AVVLDSEPLLGPEELDLARWVAARYLAPLGQVLPLFLPPGQRPDRRRTVRERHLRAYRLA
VSEEAARAALAELVRAPRQRQALEFLLEQESGPVPARELAARAGDGAARGLLERGLVEAV
PLSLERNPYAGWRDPTPPPRLSPEQAQVLQEASRRLEGGGTILLHGVTGSGKTEVYLRLI
ETVLARGKQAILLVPEISLTPQAMRRFQGRFPGRVAMLHSGMSDGERYDQWWKVRRGEAS
VVVGARSAVFAPVRDLGLVVVDEEHASSYKQEETPRYHAREVAVERARRQGALCVLGSAT
PSLESFLAAEEGRLVRLQLRHRVDGRSLPRVRLVDLRQELKEGHQGLFSRALEQALASRL
ERDEQAILLLNRRGYQSFLLCRECGAVVECPHCQVTLTYHKVGHALRCHYCGTEQPVPER
CPACGTGELSGLGLGTQQVEEELRRLFPAARVLRMDADTTTRKGAHDQILRRFEAGEGDV
LVGTQMVAKGLDYPGVTLVGVIDADTSLRLPDFRGAELAFQLVTQVAGRSGRGVLPGEVV
VQTYLPEHYSLQAAREHDYPSFFRRELVYRKRLGYPPLSHLLRLLVQAPAADAAEDEAGA
LARELKERRRGGAPYRVLGPAPAPLGRLKDLYRWHVLLVGPLEALLEAGRAVRERRPGRS
CQVVEDMDPVSLL
NT seq 2202 nt   +upstreamnt  +downstreamnt
gtggcggtggacctgccgctgcccggagcgatggagagcttggactacgcggtgcccgag
cgcctccgcccgcaggttcgcctgggaacccgggtgcaggtaccggtgcgggcccgcgcc
gtgcagggctgggtggtggccgtgcaccaggggccgcccacccggccgctgcgcgaggtg
gccgtggtgctggactcggagccgctgctggggcccgaggagctggacctggcccgctgg
gtggccgcgcggtacctggccccgctggggcaggtactacccctcttcctgccgcccggc
cagcggccggatcgccggcggaccgtgcgcgagcggcacctgcgcgcctaccgcctggcc
gtttcggaggaggcggcgcgggcggcgctggcggagctggtccgagcgccccgccagcgc
caggcgctcgagttcctgctggagcaggagagtggcccagtgccggctcgggagctggcc
gcccgggcgggggacggcgcggcccgcgggctgctggagcggggcctggtggaagcggta
ccgctctcgctggagcggaacccctacgccggctggcgggaccctacgcctccgccccgg
ctgagcccggagcaggcccaggtgctgcaggaggcgtcccgccgcctggagggaggcggc
acgatcctcctccacggggtcacggggagcggcaagaccgaggtgtacctgcgcctgatc
gagacggtcctcgcccggggaaagcaggcgatcctgctggtccccgagatctccctcacg
ccccaggccatgcgccgcttccagggccgcttccccgggagggtggccatgctccactcg
ggcatgtccgacggggagcgctacgaccagtggtggaaggtgcgccggggcgaggcgtcg
gtggtggtgggcgcccgttcggcggtcttcgcccccgttcgcgacctggggttggtggtg
gtggacgaggagcacgcctcgtcctacaagcaggaggagaccccccgctaccatgcccgg
gaggtggcggtggagcgggctcgccgccaaggcgccctgtgcgtgctgggaagcgccacc
ccttccctggagagtttcctggccgccgaggaagggcggctggtgcggctccagctccgt
caccgggtggacgggcgctcgcttccccgcgtgcgcctggtggacctgcggcaggagttg
aaggaggggcaccaggggctcttcagccgcgcgttggagcaggcgctcgcctcgcgcctc
gagcgcgacgagcaggcgatcctgctcctcaaccggcggggataccagagcttcctcctc
tgccgggagtgcggggcggtggtggagtgcccccactgccaggtgacgctcacctaccac
aaggtgggccacgcgttgcgctgccactactgcgggaccgagcaaccggtccccgagcgg
tgcccggcgtgcggtaccggcgagctgagcgggctgggcctggggacccagcaggtggag
gaggagctgcggcggctctttccggcggcgcgggtgctccgcatggacgcggacaccacc
acccgcaagggcgcccacgaccagatcctccggcggttcgaggccggagagggcgatgtt
ctggtgggcacccagatggtggccaagggcctggattaccccggcgtcacgctggtgggg
gtcatcgacgccgacacctccctgcgcctgcccgacttccggggcgccgagctggcgttc
cagctcgtcacccaggtggcgggccgctcggggcggggggtgctgcccggcgaggtggtg
gtgcagacctacctacccgagcactacagcctgcaggccgcccgcgagcacgactaccca
tccttcttccggcgggagctcgtttaccggaagcggctgggttacccgcccctcagccac
ctgctgcggctgctggtgcaggctcccgccgcggacgcggccgaggatgaagccggggcg
ctggcccgcgagctgaaggagcggcggcgagggggggcgccctaccgggtgttgggaccg
gcccccgccccgctgggccgcctgaaggacctgtaccggtggcacgtgctcctggtgggt
cctctggaagccctgctcgaagcggggcgggcggtgcgcgagcggcggccggggcggagc
tgccaggtggtggaggacatggatcccgtcagcctgctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (52)   

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