KEGG T00946: JDM1

Lactiplantibacillus plantarum JDM1: JDM1_0568

Entry

JDM1_0568         CDS       T00946

Symbol

rsmc

Name

(GenBank) 16S RNA methylase

K00564

16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]

Organism

lpj Lactiplantibacillus plantarum JDM1

Brite

KEGG Orthology (KO) [BR:lpj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lpj03009]
    JDM1_0568 (rsmc)
Enzymes [BR:lpj01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.172  16S rRNA (guanine1207-N2)-methyltransferase
     JDM1_0568 (rsmc)
Ribosome biogenesis [BR:lpj03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    JDM1_0568 (rsmc)

SSDB

Motif

Pfam:

MTS PrmA Methyltransf_31 Methyltransf_25 Methyltransf_16 Met_10 tRNA_U5-meth_tr Methyltransf_12 MTS_N Methyltransf_4 Methyltransf_18

Other DBs

NCBI-ProteinID:

ACT61457

Position

599988..600596

AA seq 202 aa
MTNYYYTHNPDIVHDEKQWNFEIFNHSFKFTTDNGVFSKRTVDYGSRTLLAAFDPTDLPA
GPMLDLGTGYGPIGMALAYQSPERTVDMVDVNELALSLARKNVALNQITNTNIFTFDVYQ
QVTATNYAAIVTNPPVRAGKAVVDAMLTGAVSRLVVGGTLTVVLQKKQGAPSAKKLMQTT
FGNCQVIKKDKGYYILQSVKEG

NT seq 609 nt +upstreamnt +downstreamnt
atgaccaactattattatacacacaatccggatattgtgcatgatgaaaagcaatggaat
tttgaaatttttaatcactcgtttaaatttacgacggacaacggtgtcttctccaagcgt
accgtggattacggctcacgaacactacttgcagcgtttgatccaactgatttgccagcg
ggcccaatgctagatttgggaaccggatatggtcccattgggatggcgctcgcgtatcaa
tcacccgaacgaacggttgatatggtcgatgtgaacgagttagcgctaagcttagcgcgt
aaaaatgttgctttgaaccaaattacgaataccaatatttttacgtttgatgtctatcaa
caagtgaccgcgactaattacgcggcgattgtcaccaacccaccggtgcgcgcaggtaag
gcagtggtggatgcgatgttaacgggggccgtttcacggctagtcgttggtggaacactc
accgtcgttttacagaaaaagcagggcgcaccatctgcgaagaaattgatgcaaacgacc
tttggtaattgtcaggtgattaagaaggacaaagggtattacatcctacaaagtgtaaag
gagggatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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