KEGG   Lactiplantibacillus plantarum JDM1: JDM1_0939
Entry
JDM1_0939         CDS       T00946                                 
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lpj  Lactiplantibacillus plantarum JDM1
Pathway
lpj03420  Nucleotide excision repair
lpj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lpj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    JDM1_0939 (pcrA)
   03430 Mismatch repair
    JDM1_0939 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpj03400]
    JDM1_0939 (pcrA)
Enzymes [BR:lpj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JDM1_0939 (pcrA)
DNA repair and recombination proteins [BR:lpj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JDM1_0939 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     JDM1_0939 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C PcrA_UvrD_tudor AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 ResIII MSSS
Other DBs
NCBI-ProteinID: ACT61826
Position
1001118..1003385
AA seq 755 aa
MSKESLLAGMNDKQQEAVLDTEGPLLIMAGAGSGKTRVLTHRVAYLIEEQGVNPWNVLAI
TFTNKAAREMRERVGKLLGESAQEVWVSTFHALCVRILRRDIEQIGYNRAFTIAGTSEQR
TLVKRILTEQNIDSKKFDPRSILSAISNAKNDLQTPEMYKESAASPFESVVADVYLQYQR
ELAADQAVDFDDLIMLTIQLFKQNPETLAWYQNKFHYIHVDEYQDTNNAQYTLVNLLADK
YKNLCVVGDADQSIYGWRGANMENILDFEKDYPQADTVMLEQNYRSTKTILSAANAVINN
NSTRRPKKLWTENEPGDKISYYRGQSESDETHFVIAKIQESMQQDKMDYGDFAILYRTNA
QSRVMEESLVKANIPYTMVGGNKFYDRKEIRDVLSYLTLAVNDQDSMNFERVVNEPKRGI
GQTSVEKLRLFADEAGYSMLEAASNVDMANGISARAKGALAKFAATMNELRAMREYLSVT
DLTQEILDRTGYMKALKDAKATKSLEAQARIENIEEFLSVTKQFDDSYQPEDEDSDKFVD
FLADLALVSDVDNVEEEPQAVTLMTLHAAKGLEFPVVFLIGMEEGIFPLSRAMMDEDELE
EERRLAYVGITRAEKKLYLTNAYSRMLYGRRQNNPASRFVEEIEPELLKNENTLDGASNT
GPKVPFGEDRERRAFTPSYKKNPVGTRATVKKASGTGADKNSWSIGDKVKHRKWGTGTVV
KVSGAGEDAELDIAFKSEGIKRLLAAFAPIQKVQD
NT seq 2268 nt   +upstreamnt  +downstreamnt
gtgtcgaaagaaagcctattggcaggaatgaatgacaagcagcaagaagccgttttagac
acagaaggaccgctactaattatggccggtgcgggctcggggaagacccgtgtattgacg
caccgggtagcttatttaattgaagagcaaggggtcaacccctggaatgttttagcgatt
acgtttacgaacaaggccgcacgcgaaatgcgtgaacgggttggtaagctgttaggtgaa
tcggcgcaggaggtctgggtctcaacgttccatgccctgtgtgtccgaattttacgacgt
gacattgaacaaatcgggtataaccgagcgttcacaatcgccggcactagcgagcaacgg
accttagtcaaacgaatcttgacggaacaaaatatcgattcgaaaaaatttgatccacgg
tcaatcttatccgcaatttcaaatgcgaaaaatgacttacaaacgccggagatgtataaa
gaatcggctgccagtccctttgagagtgtcgtggcagacgtttatttgcaataccaacgt
gaattagcggctgatcaagccgttgactttgatgatctgatcatgctgacgattcaatta
ttcaagcagaatcctgaaacgctggcgtggtaccaaaacaaattccattatattcacgtg
gatgaatatcaagatactaataacgcacagtatacgttagtcaacttgttagctgacaaa
tataaaaatttatgtgtagttggggatgcggatcaatccatctatggttggcggggtgcc
aacatggaaaatattctcgatttcgaaaaggattatccgcaagctgacacggtgatgttg
gagcaaaactatcgttcgaccaagacaattttgtcggcggctaatgcagttattaacaat
aattcaacgcggcggccgaagaaattatggactgagaatgaaccgggtgacaagatttct
tattatcgaggtcagagtgaaagtgatgaaactcactttgtcattgccaagattcaagaa
agcatgcagcaggacaaaatggactacggcgattttgcgatcctttatcggacgaacgca
caatcccgggtaatggaagagtcactcgttaaggcgaacatcccctatacaatggtcggt
ggtaataagttctatgaccgtaaagaaattcgggacgtcttatcctacttgactttggca
gtgaacgatcaagattcaatgaactttgaacgggtcgttaatgaacctaagcgcggcatt
ggtcaaacgagtgttgaaaaattgcggttgttcgcggatgaagcgggttattccatgttg
gaagcagctagcaatgttgatatggctaatggcatttcagcacgagcgaagggtgcttta
gcgaagtttgcagcgacgatgaatgaattgcgcgctatgcgggaatacttatccgtgacg
gatttaacacaagagattcttgaccgcacgggttacatgaaggcgttgaaagatgctaag
gcaacgaaatcgttagaggcacaagcccgtatcgaaaacattgaagaattcttgtctgtc
accaaacaattcgatgatagttatcaacctgaagatgaagatagtgacaaattcgtggac
ttcttagcggatttagcactggtttcggatgtggataacgttgaggaagaaccccaagcc
gtgacgctgatgacgttacatgcagcgaaggggctagaatttccggttgttttcttgatt
gggatggaagaaggtatcttcccactgtcccgggcaatgatggatgaagacgagctggaa
gaagaacggcggttagcatacgttgggattacgcgggctgagaagaagctgtacttgacc
aatgcatactcacggatgctttacggtcggcggcagaataatccggcttcccgtttcgtt
gaagaaatcgaaccagaattactcaaaaatgaaaatacgttggatggtgcaagtaacact
ggtcctaaagttccatttggtgaggatcgtgaacggcgtgcttttacaccttcatataaa
aagaatccagtggggacgcgggccacggtcaagaaggctagtggcacgggtgctgacaag
aatagttggtcgatcggtgataaagtcaagcatcgtaagtggggaaccggaacggtcgtg
aaggtctccggtgctggtgaagatgctgaactagacattgctttcaaatctgaaggaatc
aagcggttattagccgcatttgcaccgatccaaaaagtacaggactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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