KEGG   Lactobacillus plantarum WCFS1: lp_0550Help
Entry
lp_0550           CDS       T00115                                 

Gene name
lysS
Definition
(RefSeq) lysine-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
lpl  Lactobacillus plantarum WCFS1
Pathway
lpl00970  Aminoacyl-tRNA biosynthesis
Module
lpl_M00360  Aminoacyl-tRNA biosynthesis, prokaryotes
Brite
KEGG Orthology (KO) [BR:lpl00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    lp_0550 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lpl01007]
    lp_0550 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lpl03016]
    lp_0550 (lysS)
Enzymes [BR:lpl01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     lp_0550 (lysS)
Amino acid related enzymes [BR:lpl01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   lp_0550 (lysS)
Transfer RNA biogenesis [BR:lpl03016]
 Eukaryotic Type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    lp_0550 (lysS)
 Prokaryotic Type
   Other AARSs
    lp_0550 (lysS)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID: 1061906
NCBI-ProteinID: YP_004888552
UniProt: Q88Z28
Position
500766..502265
Genome map
AA seq 499 aa AA seqDB search
MARQEQTMNDQLKVRREKMDELREEGIDPFGHRFERTDLAQDLQDKYGDMDKDELDAKQV
VATIAGRMLAKRGKGKVGFADIWDRSGKMQLYIRKDVVGEDTYHIFKRSDIGDFLGITGQ
VFKTDFGELTIKVTGLTFLSKALRPLPDKFHGLQNVEQIYRQRYLDLISNRDSFDRFLKR
TKIISAIRHHLDDQGFTEVETPMLHNQAGGAAARPFVTHHNALNIDLYLRIALELHLKRL
IVGGMEKVYEIGRVFRNEGMDREHNPEFTMMETYVAYFDFHDVMAETEGIFKAAAQAVTD
DGIVTYHDQKVDFNQPFKQIHMVDAIKEKTGIDFWQPMSIEDAQKLADEHHVKYEPYWKV
GHIINAFFEEFVEDTLNEPTFVYGHPVEISPLAKKNEEDPRFTDRFELFILGNEYANAFS
ELNDPIDQRQRFEAQAAERTAGNDEAEHIDEDFVEALEYGMPPTGGLGIGIDRLVMLMTD
ADSIRDVLLFPTMRPEEDK
NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt
gtggcacgacaagaacagacgatgaacgaccaactgaaggttcgtcgcgaaaaaatggat
gaactgcgtgaagaggggattgatccctttggtcaccggttcgaacggactgatttagcc
caggacttgcaagacaagtatggggatatggataaggacgagctagacgctaaacaagtg
gtggcaaccattgctggacggatgctagctaagcgtggtaagggtaaagtcggttttgct
gatatctgggatcgctcaggtaagatgcagttatacattcgtaaagatgtagtcggcgaa
gatacttaccatatcttcaagcgttctgatattggtgatttccttggaattaccggccaa
gtttttaagacggactttggcgaattaacgattaaagtaactggtttaacgttcttatca
aaggcgttacgaccattgccagataagttccatgggttacagaatgtggaacagatctat
cgccaacggtatttggacttgatctctaaccgcgatagctttgatcgtttcttgaagcgg
acgaagatcatttcagcgattcggcatcatttagacgatcaaggcttcacagaagttgag
acgccaatgttgcataatcaagctggtggtgcggcagcacggccatttgtgactcaccac
aatgcgttgaacattgatctctacttacgaattgcgttggaattacatttgaagcgcctg
atcgttggtggcatggaaaaggtttatgagattggtcgggttttccgtaatgaagggatg
gaccgtgaacataatcctgaatttaccatgatggaaacttatgtcgcctatttcgacttc
catgatgtaatggctgagacggaaggtatttttaaagccgcagcgcaagccgtaactgac
gatggcattgtcacttatcatgatcaaaaagttgatttcaatcaaccatttaagcaaatt
cacatggtcgatgcgattaaagaaaagactgggattgatttctggcaaccaatgtcaatt
gaagatgcacaaaaattggcggatgaacatcacgtgaagtatgaaccatactggaaagtt
ggtcatatcattaatgcgttctttgaagaatttgttgaagacacgttgaatgagccaacc
tttgtttatggtcatccagttgaaatttcgccattagctaagaagaatgaagaagatcca
cggtttactgatcgttttgaactcttcatcttaggtaatgaatacgccaatgcgttcagt
gaattgaatgatccaattgaccaacggcaacgtttcgaagctcaggctgcggaacggact
gctggtaacgacgaagctgaacatattgatgaagactttgtcgaggcgttggaatacggg
atgccgcctactggtgggttaggtatcgggattgatcggttggttatgttaatgacggat
gcggattcgattcgtgatgtcttacttttcccaacgatgcgtccagaagaagataaataa

DBGET integrated database retrieval system