KEGG   Lactobacillus plantarum WCFS1: lp_2019Help
Entry
lp_2019           CDS       T00115                                 

Gene name
dltA
Definition
(RefSeq) D-alanine--poly(phosphoribitol) ligase subunit 1
  KO
K03367  D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
Organism
lpl  Lactobacillus plantarum WCFS1
Pathway
lpl00473  D-Alanine metabolism
lpl01100  Metabolic pathways
lpl01503  Cationic antimicrobial peptide (CAMP) resistance
lpl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:lpl00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    lp_2019 (dltA)
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    lp_2019 (dltA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    lp_2019 (dltA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:lpl01504]
    lp_2019 (dltA)
Enzymes [BR:lpl01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.13  D-alanine---poly(phosphoribitol) ligase
     lp_2019 (dltA)
Antimicrobial resistance genes [BR:lpl01504]
 Gene sets
  CAMP resistance modules
   Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:M00725]
    lp_2019 (dltA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: AMP-binding AMP-binding_C
Motif
Other DBs
NCBI-GeneID: 1062221
NCBI-ProteinID: YP_004889781
UniProt: Q88VM6
Position
complement(1820618..1822144)
Genome map
AA seq 508 aa AA seqDB search
MIKNIITTIDDYARTQPNNVVYDVQGVTHTYAELKAYSDALAAHLDTLDLPAKDPIIVFG
GQTFEMIATFLGVVKSGRAYIPIDTHSPNERLTMINEIAKPAAVIAVADLPTGVGTTPVI
TPDQLAAIFATPVDYQADHVVSGDDNYYIIFTSGTTGMPKGVQISHDNLVSYVDWMLSDD
FGLPDQPNSLSQPPYSFDLSVMDVYPTLALGGTLYALPKAVTDDFKQLFAALPTLPINVW
VSTPSFMDICLLEPKFNAENLPTLTHFLFCGEELTHKTAATLKKRFPDARIFNTYGPTET
CVAVTQIEITDAALAQYDRLPIGYAKADTRILVVDENGEAVPNGTEGELIIAGPSVSKGY
LNNSEKTAKAFFELDGQPAYHSGDIGTMDADGLFRYRGRVDFQIKMHGYRIELEEVDHFL
AQQQHIKQAVAVPKYDKEHKVTQMIAYVVPKPNDFESDFALTTAIKKDLQGMMMEYMIPQ
RFVYQTSLPLTPNGKIDVKSIIKEVNPE
NT seq 1527 nt NT seq  +upstreamnt  +downstreamnt
atgattaagaacatcattacaacgattgatgattatgcacggacgcaacccaataacgtg
gtttatgatgtgcaaggtgtaacgcacacttatgcggaattaaaagcttattcagatgcc
ttggcggcgcatcttgacacgctcgatttaccagccaaggatccaattattgtgtttggt
ggtcagacgtttgaaatgattgcgactttcttaggagttgttaagtcaggtcgggcgtat
attccaatcgatacacattcaccaaatgagcggttaacaatgattaatgagattgctaag
ccagctgccgttattgctgttgctgatttgccaaccggtgtcgggacaacccccgtgatt
acaccagatcaattggcggctatctttgcgactcccgttgattatcaagcggatcatgtc
gttagtggcgatgataattactatattatctttacttctggtaccactgggatgccaaag
ggggtccaaattagtcatgataacttggtcagttacgttgactggatgttgagtgatgac
ttcggattgcctgaccagccgaactcgctgtcgcaaccaccatattcatttgacctatcc
gtgatggacgtttacccaaccttagcgttaggtgggacactatacgcattaccgaaggcc
gtgacagatgatttcaaacaattatttgctgcgttgccgacgttaccaatcaacgtttgg
gtctcaacaccatcatttatggacatttgtttgctagaaccaaagtttaatgctgaaaac
ttgccaactttgacgcacttcttgttctgtggtgaggaactcacacataagacggcggcg
acactcaagaaacggttcccagatgcccggatcttcaatacgtacgggccaactgaaacc
tgcgtcgcggtaactcaaattgaaattacggatgccgcattagcgcagtatgatcggcta
ccaattggttatgccaaagctgatacgcggatacttgtggttgatgaaaatggtgaggcg
gttccaaatggcacggaaggtgaactgattatcgccggaccatccgtttcgaaggggtat
ttgaacaactctgaaaaaactgccaaggctttctttgaattagacgggcaacccgcctat
cattctggtgatattggcacgatggatgcggacggtctgttccgttatcgtggccgcgtt
gattttcaaattaaaatgcatggttaccgcatcgaactagaagaagtggatcacttctta
gcacagcaacagcatattaaacaagccgttgccgttccaaaatacgataaagagcacaaa
gtaacgcaaatgattgcgtacgtggtaccaaagccgaatgacttcgaaagtgactttgct
ttgaccactgcaattaaaaaggacctacaaggaatgatgatggaatacatgattccacaa
cggttcgtctatcaaacgagcttgccattaacgcctaacggtaagattgatgtcaagtcg
atcattaaagaggttaacccagaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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