KEGG   Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_0077
Entry
LP6_0077          CDS       T02689                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
lpm  Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lpm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LP6_0077 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpm03400]
    LP6_0077 (uvrB)
DNA repair and recombination proteins [BR:lpm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LP6_0077 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LP6_0077 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_19 HEM4 UB2H AAA_5
Other DBs
NCBI-ProteinID: AGN13002
Position
78867..80858
AA seq 663 aa
MKDLFKIYSNYQPAGDQPTAIASLIDGLESGLAKQTLLGVTGSGKTFTIAHVIQAMKRPT
LIMAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPASDTFIEKDASINEHIE
QMRLSATKALIERKDAIIVATVSAIYGLGDPDSYLRMLLHLSRGEQSDQRKILKRLAEMQ
YTRTNLSLERGQFRVHGDVIDIFPADSEKEAIRIELFDDEVDNIARFDPLTGEILQRLPR
VTIFPKTHYVTPRERILETVEKVKVELQERLAELNAQNKLVEAQRLEQRTCFDIEMMLEL
GYCSGIENYSRYLSNREAGEAPPTLFDYLPPEALLIIDESHVTVPQIGGMYRGDRARKET
LVNYGFRLPSALDNRPLRFEEFEERSPQTIYISATPGPYEQEHSDNVAEQVVRPTGLIDP
EVEIRPVKTQVDDLMSEIRQVIAQGSRILVTTLTKRMAEDLTEYLSEHGIKVRYLHSDVD
TVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTIGR
AARNVKGRAILYADTITGSMQRALTETERRREKQKAFNLEHGITPKGINKSVEDILEGAY
IGKRKTVVAEKSPQYTHWSPQELVKQINALEKQMYSHAQNMEFELAAKIRDEYLLLKEQL
MKI
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaaagacttatttaaaatttactcaaattaccaacctgccggcgatcaacctacagcc
atagcctctttgattgatggtcttgaatcaggtttagccaaacaaacattattaggcgtt
accggttctggtaaaacatttactatagctcatgttattcaagccatgaaaagacccact
ttgatcatggcaccgaacaaaacgcttgcggctcaactttatggagagtttaaagccttc
tttcctgataatgccgtagaatatttcgtttcctactacgattactatcagcccgaagcg
tatgtgcctgcttcagatacttttatagaaaaggatgcctccattaatgaacatatagag
cagatgcgcttgtcggcaaccaaagcgttgattgaacgcaaagatgccattattgtagcg
acggtttctgccatttatggattgggcgacccggattcctatctgcgtatgttattacat
ctctcccgtggagaacaatccgatcagcgtaaaattttaaagcgtcttgcagaaatgcag
tacacacgaaccaatctcagccttgagcgcggtcaattccgggtacatggtgatgtcatt
gatattttcccggctgattccgagaaagaagcgataagaattgagctttttgacgatgag
gttgataatattgcccgctttgatcctttaacgggagaaattttacagcggttgccccgt
gtcactatttttcctaaaactcattatgtcactcccagagaacgtattttagaaacagta
gaaaaagtaaaagtagaattacaggaaaggctggctgagttgaatgctcaaaataagttg
gtagaagctcagcgtttggagcaaagaacttgttttgatattgaaatgatgttggagttg
ggttattgctctggcattgaaaattactcgcgttatttatccaaccgcgaagcaggggaa
gcaccgcctactctttttgattatctcccgcccgaagccttgctaattatcgacgaatcg
catgttactgttcctcaaataggtgggatgtatcgcggagacagggcgcgcaaggaaacc
ttggttaattatggatttcgcctgccttctgccttggataataggcctttgcgttttgaa
gaatttgaagagcgttcgccgcagactatttatatttcagcaactccagggccttatgaa
caggaacattcggataatgtggctgaacaagtggtaagaccgactggattgattgatcct
gaggtggaaatcaggccggtaaaaactcaggtggatgatcttatgtctgaaatcagacag
gtgatcgctcagggcagccgtattcttgtcacgacattaaccaaacgcatggcagaggat
ttgacagagtatctgagtgagcacgggatcaaggtgcgctatttgcattccgacgtcgat
acggttgagcgcatggaaattattcgtgatttgcgtttgggtgagtttgatgttctggta
gggattaatttattgcgcgaaggtcttgatatgcccgaggttgctcttgttgcgattttg
gatgctgacaaggaaggttttttacgatcggagcgttctttaattcaaacgattggccgt
gcagcgcgtaatgtgaaggggcgagctattttgtatgccgataccattactggttcgatg
caaagagcattgacggaaacagagagacgacgtgaaaagcaaaaagcattcaatttggaa
cacggcattactcccaagggtattaataagtctgttgaggatattttggaaggtgcctat
atcggtaaacgaaaaacagtggttgctgaaaaatctccccaatatactcattggtctcct
caggaactggtaaaacagattaatgcgctcgaaaaacaaatgtattctcatgctcaaaac
atggaatttgaattggcagctaaaattcgcgatgaatacctgctattaaaagagcagttg
atgaagatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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