KEGG   Lonsdalea populi: I6N93_12880
Entry
I6N93_12880       CDS       T06954                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lpop  Lonsdalea populi
Pathway
lpop03030  DNA replication
lpop03430  Mismatch repair
lpop03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I6N93_12880 (dnaQ)
   03430 Mismatch repair
    I6N93_12880 (dnaQ)
   03440 Homologous recombination
    I6N93_12880 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpop03032]
    I6N93_12880 (dnaQ)
   03400 DNA repair and recombination proteins [BR:lpop03400]
    I6N93_12880 (dnaQ)
Enzymes [BR:lpop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I6N93_12880 (dnaQ)
DNA replication proteins [BR:lpop03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     I6N93_12880 (dnaQ)
DNA repair and recombination proteins [BR:lpop03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     I6N93_12880 (dnaQ)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QPQ23514
Position
complement(2933641..2934375)
AA seq 244 aa
MSTEITRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRNYHVYLKPDRLIDP
EAYNIHGISDEFLADKPSYADIADDFMDFIRGAELVIHNAAFDIGFMDYEFRMLQRDIPK
TETFCKITDSLLLARKLFPGKRNNLDALCDRYLIDNTKRTLHGALLDAEILAEVYLAMTG
GQRSLALSMDNEGAQQANQADTIQRIVRPASALPVIYASDDELMAHEQRLDLIVKKGGNC
LWRD
NT seq 735 nt   +upstreamnt  +downstreamnt
atgagcactgaaataacacgacaaatcgtcctggataccgaaaccacgggtatgaacaag
ttgggtgttcattacgaaggtcatcgcatcatcgaaatcggtgccgttgaggtgataaat
cgtcgtctgaccggccgcaactatcatgtttacctcaaacccgatcgcctaatcgaccct
gaagcctacaacattcacggtatcagcgacgaatttctggccgataagccctcctatgcc
gacattgccgacgacttcatggattttatccggggcgccgaactggtcattcataacgcg
gcgtttgatatcggctttatggactacgagttccgtatgctgcagcgggatattccaaag
acggaaaccttctgcaaaatcacggatagccttttgttggcccgtaaactcttccccggt
aaacgcaacaatctggatgcgttgtgcgatcgctatctgatcgacaataccaagcgcacg
ttgcacggcgcattgctcgatgccgagatactggcggaagtctatctggcgatgaccggc
ggccagcggtcgctcgcgctttccatggataacgaaggggcgcagcaggccaatcaggcg
gacaccattcagcgtatcgtgcgcccggcgtcagcgttgccggtgatctacgccagcgac
gatgagctgatggcgcatgaacagcggctcgacctgatcgtgaaaaaaggcggcaactgc
ctgtggcgtgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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