KEGG   Limnobaculum parvum: HYN51_11900
Entry
HYN51_11900       CDS       T05491                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
lpv  Limnobaculum parvum
Pathway
lpv02024  Quorum sensing
lpv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HYN51_11900
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HYN51_11900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpv03019]
    HYN51_11900
   03036 Chromosome and associated proteins [BR:lpv03036]
    HYN51_11900
Messenger RNA biogenesis [BR:lpv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HYN51_11900
Chromosome and associated proteins [BR:lpv03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HYN51_11900
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AWH89189
UniProt: A0A2Y9U0J3
Position
480036..480326
AA seq 96 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNAPTGSVGNYQGGMPSQQEDDVSE
NT seq 291 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagacccgtttttaaacgcacttcggcgtgaacgtgtt
ccagtttctatttatctggtaaacggtattaagttacaaggccaaatcgaatctttcgat
caattcgttatcctgttgaaaaatacggttagccaaatggtatataagcacgctatctcc
actgtggttccttctcgtccagtttcgcatcatagtaatgcaccaactggaagtgtgggt
aactaccaaggtggtatgccatcacaacaggaagatgatgtatctgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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