KEGG   Lactobacillus paragasseri: LpgJCM5343_00330
Entry
LpgJCM5343_00330  CDS       T05840                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
lpw  Lactobacillus paragasseri
Pathway
lpw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lpw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LpgJCM5343_00330 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpw03400]
    LpgJCM5343_00330 (xthA)
Enzymes [BR:lpw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     LpgJCM5343_00330 (xthA)
DNA repair and recombination proteins [BR:lpw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     LpgJCM5343_00330 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: BBD47680
Position
34083..34910
AA seq 275 aa
MRLISWNIDSLNAALTSDSARAKLTRGVLNTIKEKDPDIIAIQETKLRSTGPTKKHQEIL
AEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPVIGAPEPMDHEGRILTLEFD
NYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQVKPVIASGDYNVAHTPIDLKHP
ENNHHNAGFTDEERQDFDKLLKLGFTDTFRKIHGNVEGVYSWWAQRVRTSKANNSGWRID
YYIVSNRIANQVTKSEMLDTGERKDHCPIMLEINL
NT seq 828 nt   +upstreamnt  +downstreamnt
atgcgtttaatttcatggaatattgattcgctaaatgctgctttaactagtgattcagca
cgtgccaagcttacacgtggcgttttaaatacaattaaagaaaaagatcctgatattatt
gccattcaagaaactaaattacggtcaactggtccgactaagaagcatcaagaaattttg
gccgaaatgtttcctgactatgattatgtttggcgctcttctgaagaacctgcacgaaaa
ggttatgctgggacaatgtttttatataaaaatactttgactccagaagtaactaagcca
gtaattggggcgccagaaccaatggatcatgaaggccgaattttaactttagagtttgat
aactattatgttacccaagtttatacgccaaattctggaaatgaattgaagcgattagat
gatcgtcaggtttgggatgaaaagtatacagagtatttacaaaaattagatcaagtaaag
ccggtaattgctagcggtgactataacgttgctcatacaccaattgatttgaagcatcca
gaaaataatcatcataacgctggttttaccgatgaggaacggcaagactttgataagttg
ctcaagcttggctttactgatacatttagaaaaattcatggcaatgtcgaaggagtttat
tcttggtgggctcaaagagtgagaaccagcaaggctaataactcgggctggagaattgac
tattacatcgtgtctaatagaattgctaatcaggtaactaagtcagaaatgctcgatact
ggtgagcgaaaagatcattgtccaattatgttagaaattaatctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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