KEGG   Lactobacillus paragasseri: LpgJCM5343_02080
Entry
LpgJCM5343_02080  CDS       T05840                                 
Symbol
rnmV
Name
(GenBank) ribonuclease M5
  KO
K05985  ribonuclease M5 [EC:3.1.26.8]
Organism
lpw  Lactobacillus paragasseri
Brite
KEGG Orthology (KO) [BR:lpw00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    LpgJCM5343_02080 (rnmV)
Enzymes [BR:lpw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.8  ribonuclease M5
     LpgJCM5343_02080 (rnmV)
SSDB
Motif
Pfam: DUF4093 Toprim Toprim_4 DUF4435 ZnuA Toprim_2 Beta-Casp
Other DBs
NCBI-ProteinID: BBD47855
Position
244668..245231
AA seq 187 aa
MESNNQKQFNAVVVVEGRDDTKRLKQFFPGIETIETNGSEVSDQTLAEIKKLAKTREIII
FTDPDYNGERIRRLVTNAAPNAKQAFITRKEGEPTKRGNSLGVEHASKEALVRALGDLHE
VQAVESDITKEKYDDLGLAVSPEARLLREKVGIKLGIGYGNSKQFLKRLKMFGITYKELK
RAVEDVK
NT seq 564 nt   +upstreamnt  +downstreamnt
atggaatcaaataatcaaaaacagtttaatgcggtagttgttgttgaaggacgagacgat
accaagagattaaaacagtttttcccaggaattgaaactattgaaactaatggctcggag
gtatctgatcaaactttagcagaaattaagaaactggcaaaaacacgagaaataattatc
tttacagatccagactataatggtgaaagaattagaagactggtgactaatgctgcaccc
aatgctaaacaagcttttatcactcgtaaagagggagagccaactaagagaggaaatagc
ttaggagttgaacatgcgtcaaaagaagcactagtacgtgctttgggtgatttgcacgag
gttcaagcagtagagagtgatattactaaagaaaagtatgatgatttgggtctagcagtt
agtccagaagcgcgtcttttacgtgaaaaagttgggattaagttaggaattggatatgga
aatagtaaacaattcttaaagcgcttaaaaatgtttggaattacttataaagaattaaag
agggcagttgaagatgtcaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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