KEGG   Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1003
Entry
LRHK_1003         CDS       T01961                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
lra  Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LRHK_1003 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lra03400]
    LRHK_1003 (xth)
Enzymes [BR:lra01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     LRHK_1003 (xth)
DNA repair and recombination proteins [BR:lra03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     LRHK_1003 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AER63792
Position
complement(953299..954057)
AA seq 252 aa
MKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELDLPGYYQYFNYAERK
GYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDYRQ
QWDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQLNS
GFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKILTQIMGSD
HCPVELVTQDLV
NT seq 759 nt   +upstreamnt  +downstreamnt
ttgaaaatgatttcatggaatgtaaacggcttacgagcggttttaaaaaaagactttatg
acgatttttaacgaattggatgcagattggttttgtcttcaggaaacgaagatgcaggct
ggtcaggtagaactcgatttgcccggctactatcaatattttaattatgccgaacgtaaa
ggttattcgggaaccgccatttttactaagcacaagccgctgaatgtcacgtatggcatg
ggcatccctgaacatgataccgaagggcggatcattacgcttgaatatcccaagttttat
ttaatgacggtctatacgcctaattccggtggcgagctcaaacgactcgactatcgccaa
cagtgggatcgggattttctcgcgtacacgaatgaactggcagcaaagaaaccactcgtt
tactgtggtgatttaaacgttgcccatgaacccatcgacctgaaaaatgacaaaaccaat
caccacaacgccggctttaccgatgaagagcgggctgattttaccaaacagctcaatagt
ggcttcattgatacgttccgccatttttacccggatacggtcacatattcctggtggagt
tatcgcttccacgcgcgagctaacaatgccggctggcggattgattattttgtcgccagc
tcagcctttcaaccttacattcaggatgctaagattttaacgcaaattatgggcagcgat
cactgtcctgtcgaattggtgactcaggatttagtttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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