KEGG   Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1356
Entry
LRHK_1356         CDS       T01961                                 
Symbol
rnz
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
lra  Lacticaseibacillus rhamnosus ATCC 8530
Brite
KEGG Orthology (KO) [BR:lra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lra03016]
    LRHK_1356 (rnz)
Enzymes [BR:lra01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     LRHK_1356 (rnz)
Transfer RNA biogenesis [BR:lra03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    LRHK_1356 (rnz)
 Prokaryotic type
    LRHK_1356 (rnz)
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 PDEase_II
Other DBs
NCBI-ProteinID: AER64139
Position
1297854..1298813
AA seq 319 aa
MEIQFLGTGAGSPSKVRNVSSLALKLLDERNEVWLFDVGEGTQHQILQTTIKPRKIAKVF
ITHLHGDHIFGLPGFLASRANQGGTEPLTIYGPPGIEDFVKTSLKVSQSHLSYAIKFVLL
RHPGVIFDDQTFKVSFDRLDHRITSFGFRVEEKPHPGELLIDKVRAAKIPAGPVYASLKA
GKTVTLPDGRTFDGHDFIGSAQPGRTVAIFGDTRMCRRALPLAAGADVLVHESTFGPDES
QLAKQYYHSTNLQAAELAKRAGVGRLLLNHISARYLGPSVAMLEKSARHIFPQTHVVRDL
EEINIPFASPQLQPTVSAK
NT seq 960 nt   +upstreamnt  +downstreamnt
atggaaattcaatttttggggacaggcgcaggttcaccttccaaagtccgcaatgttagc
agtttggcgctcaagctgcttgatgagcgcaatgaggtttggttgtttgatgtgggcgaa
ggaactcagcatcaaatcttacagaccacgatcaaaccgaggaaaattgccaaagtattt
attacccatttgcatggtgatcatatttttggcttaccgggctttttagctagtcgggca
aatcaaggcggcactgaaccgttaacgatttatggacctccggggattgaggactttgtt
aagacaagtttgaaggtttctcagagtcatttgagttatgcaattaaatttgtgttgtta
cgacatccaggcgtgatttttgacgatcagaccttcaaagtcagttttgatcgacttgat
catcggattaccagttttggatttcgggttgaagaaaaaccacacccgggcgagttactg
attgataaggtccgtgccgccaagattccggctggaccggtttatgcttcgttgaaagca
ggcaaaaccgtcacattgccggatggtcggacttttgatggtcatgacttcatcggatca
gcacaaccgggtcggacagtggccatttttggcgatacgcgtatgtgtcgtcgggcctta
ccattagcagccggggcagatgtcttggttcatgaaagtacgtttggtccggatgaaagt
caactggccaagcagtattatcacagtacgaatcttcaggcagccgagttggcgaaacga
gctggcgttggtcggctgttgttaaatcatatttcagcacgctatcttggccctagtgtg
gcaatgttagaaaaaagtgcacggcatattttcccgcaaacgcatgttgtcagagatttg
gaggaaattaacattccatttgcaagtccgcaactgcaaccgactgtttccgctaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system