KEGG   Lacticaseibacillus rhamnosus GG: LGG_01411
Entry
LGG_01411         CDS       T00987                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
lrh  Lacticaseibacillus rhamnosus GG
Brite
KEGG Orthology (KO) [BR:lrh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lrh03032]
    LGG_01411 (topA)
   03400 DNA repair and recombination proteins [BR:lrh03400]
    LGG_01411 (topA)
Enzymes [BR:lrh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     LGG_01411 (topA)
DNA replication proteins [BR:lrh03032]
 Prokaryotic type
  DNA Topoisomerases
   LGG_01411 (topA)
DNA repair and recombination proteins [BR:lrh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LGG_01411 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 AHD PI_PP_I C1_2
Other DBs
NCBI-ProteinID: CAR87306
UniProt: A0A7S7FP00
Position
1411979..1414063
AA seq 694 aa
MADKKLVIVESPAKAKTIEKYLGRTYKVVASLGHIRDLPKSQMGVDVENNYKPKYISIRG
KGDVIKSLKKDAKKASRVYLAADPDREGEAIAWHVSHILGLDPNAKNRVVFNEITKDAVK
NAFKTPRGIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALKLIIDRE
NEIKNFIPEEYWSLDAEFQKGRSKKFSASFYGIKNKKMALKNNEAVQKVLSQIDKTKPFS
VTNVVKKERKRFPAPPFTTSTLQQEANRKLGFRTRKTMMLAQQLYEGINLGGKLGTVGLI
TYMRTDSTRVSNVAKTETSHYLHEKYGEAYAAVKIRQGKLQEGAQDAHEAIRPTSTLRTP
ESLASVLDKDQMKLYRLIWSRFVASEMTPAIIDTVAVTLNQNDVTFRANGSQMKFEGFTK
LYVSSRDSDEKDNVLPPLAVGDAVKMLKTDPAQHFTQPPARYSEANLVKALEENGVGRPS
TYAPTIETIQKRYYVKLNARRFEPTELGEIVNSLIVEFFPDIVNIKFTANIESELDSIET
GEANWVKVIDQFYKPFEKEVAHAETGIEKIQIKDEPAGFNCDICGAPMVIKMGRYGKFYA
CSRFPDCRNTKAIVKEIGVICPKCHKGQVVERKSKRNRVFYGCSRYPDCDFVSWDKPVGR
DCPVCGHFLVEKKSKAGTQVVCPNNDYKEALQKA
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggccgacaagaagttagtcattgttgaatcgccagccaaagccaagaccattgagaag
tatcttggtcgcacctataaagttgttgccagtttaggccatatccgtgatttacctaag
agtcagatgggcgtcgatgttgaaaataactacaaacccaagtacatctcgattcggggt
aaaggcgatgtgattaaatctttaaaaaaagacgcaaaaaaagccagccgcgtttatctc
gccgccgatccggatcgtgaaggagaagcaattgcctggcatgtcagtcatatcttaggg
cttgatccgaatgccaagaatcgggttgtttttaacgaaatcaccaaagatgccgtaaaa
aatgcatttaaaacccctcgtggtattgatatggatcttgtcgatgcgcaacaagcacgc
cgaattctcgatcggctcgtggggtactcgatcagcccgctgttgtggaagaaggtcaaa
aagggcctgagtgccggtcgggttcaaagtgttgcgttaaagctcatcattgaccgtgaa
aatgaaatcaagaactttattcctgaagaatattggtccttggatgccgaattccaaaaa
ggccgcagcaagaaattctccgccagtttttatggcatcaaaaacaagaaaatggcgctg
aagaacaatgaggcggttcaaaaagtcttaagtcagattgacaagacgaagccgttttcc
gttaccaatgtggttaaaaaagaacgcaaacgtttccctgcaccgccatttaccaccagt
accttgcaacaggaagccaaccgtaagctaggattccgcactcgtaagaccatgatgtta
gcccagcagctctatgaagggattaacttaggcggcaagttgggtacggttgggctcatt
acgtatatgcgtactgattcaacccgggtttccaacgttgccaaaaccgaaacgagtcat
tatttgcatgaaaaatatggcgaggcttatgccgctgtcaaaattcgccaaggtaagctt
caagaaggggctcaggatgcccacgaagccatccggccgacgagtacgttacgaacaccg
gaaagcttggcgtcggttttagacaaagatcagatgaaactgtaccgtttgatctggagt
cgctttgttgctagcgaaatgacgccggcgattattgacacagtcgccgtcacgctcaat
caaaatgacgtgacgttccgggcaaatggcagccaaatgaagtttgaaggctttaccaag
ctatacgtttcctcgcgtgatagcgatgaaaaggataacgttttaccaccgcttgcagtc
ggcgatgctgtgaagatgctgaaaaccgatccggcgcaacactttacccaaccaccggca
cgttattctgaagccaacttggttaaggctctggaagaaaacggggttggccgcccatcg
acgtatgcaccgaccatcgaaaccattcagaagcgctattacgtcaaactcaacgcccgc
cgctttgagcccacggaattaggcgaaatcgtcaatagtttgatcgttgaatttttcccg
gacatcgtcaatatcaagtttacggcgaatatcgaatccgaacttgacagtatcgaaacc
ggcgaagccaattgggtcaaagtcatcgaccaattctataagccgtttgaaaaagaagtt
gcgcacgccgagaccgggattgaaaaaatccaaatcaaggatgaaccggccggctttaac
tgcgatatctgtggcgcgccaatggtgatcaaaatgggacgttatggcaaattctacgcc
tgctcccgattccctgactgccgtaacaccaaagcgatcgtcaaagaaatcggcgttatt
tgtcctaagtgtcacaaagggcaggttgtggaacgcaagagcaagcgtaaccgcgtcttt
tatggctgctctcgttaccctgactgtgactttgtttcctgggataaaccggtcggccgc
gactgcccggtttgcggacatttcttagtcgaaaagaaatctaaagccggcacccaagtc
gtctgtcccaacaacgattacaaagaagccttacaaaaagcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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